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SCNpilot_expt_1000_bf_scaffold_9512_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7197..7727)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator mlrA MerR-like regulator A {ECO:0000313|EMBL:EYR81443.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 176.0
  • Bit_score: 343
  • Evalue 1.50e-91
MerR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036660A6 similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 177.0
  • Bit_score: 325
  • Evalue 3.00e-86
  • rbh
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 177.0
  • Bit_score: 323
  • Evalue 3.60e-86
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGACAAGAGTCCGGACGCTTTCCGCACCATCAGCGAGGTCGCCGACGACCTCGACCTGCCCCAGCATGTGCTGCGTTTCTGGGAAACGCGCTTCACCCAGATCAAGCCGATGAAGCGCGGCGGCGGCCGGCGCTACTATCGCCCCGAGGACGTCGATCTCCTCAAGGGCATCCGCCATCTGCTCTACGACCACGGCTATACGATCAAGGGCGTGCAGAAGCTGCTCAAGGTCAACGGCAACAAGTTCGTCGCCGCCATTGCCAGCGGCGATCTTGCGACCGTCGAGGCGCTGGCGGCCGCTAGCCACGAGGAGCCGCCCCCGCCGAAGGCCGGCAGCGACGAGGACCAGATCGTCGGCCGCGCCAAGGCGCCCGCCAGCCGCCGCTTCTTCTCCTTCGGCGGCGGCGGCGACGAGCCGCCGGAAATCTCCATCGGCAAGACGAGCGTCGGCAAGGAAGACCGCGCCCTCCTGCAGGAGGCGCTCTACGATCTCCTGGAATGCAAGCGCCTGCTCGACCAGGTTCGCTGA
PROTEIN sequence
Length: 177
MDKSPDAFRTISEVADDLDLPQHVLRFWETRFTQIKPMKRGGGRRYYRPEDVDLLKGIRHLLYDHGYTIKGVQKLLKVNGNKFVAAIASGDLATVEALAAASHEEPPPPKAGSDEDQIVGRAKAPASRRFFSFGGGGDEPPEISIGKTSVGKEDRALLQEALYDLLECKRLLDQVR*