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SCNpilot_expt_1000_bf_scaffold_4160_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2954..3997

Top 3 Functional Annotations

Value Algorithm Source
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:KEC82210.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 347.0
  • Bit_score: 656
  • Evalue 2.70e-185
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2M2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 329.0
  • Bit_score: 651
  • Evalue 3.70e-184
  • rbh
aapJ1; amino acid ABC transporter, substrate-binding component; K09969 general L-amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 342.0
  • Bit_score: 327
  • Evalue 3.80e-87

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGAAACTTGCGACTTCACTGAAACTGGGGGTTCTCGCCTGCGCGACCGCGCTGATGGGCGCCATGTCCTTTGCCGGCACCGCCGAGGCCGGCGCGACGCTCGACGCCATCAAGGCCCGCGGCAACCTCGTCTGCGGCGTCGGCCAGGCCGTTCCGGGCTTCTCCGCACCGGCCGCCAATGGCGAGCTCGCCGGCATCGACATCGACTATTGCAAGTCGATGGCTGCCGCCATCCTCGGCGACGCTTCCAAGGTAACCTACCGCCAGACCTCCTATTCCGAGCGTTTCGTCCTGCTCTCCTCGGGCGAGATCGACGTTCTGGCGCACGACACGACGACCACGCTCAACCGCGAAGGCGCCCAGAGCGCGCGCTTCGCCTCGCCGAACTATTTCGACGGCTACACCTTCATGGTGCCGAAGTCGCTCGGCGTCGACAGCCCGGACCAGCTCGCTGACGCCACCGTCTGCATCCTGCAGGGCTCGACCTTCGAGGTGAACACCGAGAACTTCTTCAAGTCGCGCGGCCTCAACTACACGCCGCTCGTCCTCAGCGCCTGGGAGCAGCTCGACGCGGCCTTCTTCGGCGGCCGTTGCGACGCCTTCGGCGGCAACTACGGCAACCTCGCCGGCTCGCGCGCCGGCAACGGCAATGTCGACGACTACATCATCTTCCCGAACTTCATCACGCTGGAGCCCTATGCGCCGGCGGTGAAGAGCGGTGACGAGGAACTCTTCCTCGTCGCGCGCTGGGTCATGTTCGCCCTCGTCGAGGCCGAGCGCCTCGGCATCACGCAGGCCAATGTCGCCGACCTCGCCAAGAACTCGCCGGATCCGGAAGTCAAGCAGCTCCTCGGCACGACGCCGGGCAACGGCAAGGACCTCGGCCTTTCCGAAGACTGGGTCGTCAAGATCGTCTCGTCCGTCGGCAACTACGGCGAGAGCTTCGAGCGCAACCTCGGCAAGGCCTCGCCCCTCAAGCTCGACCGCGGTCTCAACGACCTGTGGACGAAGGGCGGCCTCATGTACGCAGCACCCTTGCGCTGA
PROTEIN sequence
Length: 348
MKLATSLKLGVLACATALMGAMSFAGTAEAGATLDAIKARGNLVCGVGQAVPGFSAPAANGELAGIDIDYCKSMAAAILGDASKVTYRQTSYSERFVLLSSGEIDVLAHDTTTTLNREGAQSARFASPNYFDGYTFMVPKSLGVDSPDQLADATVCILQGSTFEVNTENFFKSRGLNYTPLVLSAWEQLDAAFFGGRCDAFGGNYGNLAGSRAGNGNVDDYIIFPNFITLEPYAPAVKSGDEELFLVARWVMFALVEAERLGITQANVADLAKNSPDPEVKQLLGTTPGNGKDLGLSEDWVVKIVSSVGNYGESFERNLGKASPLKLDRGLNDLWTKGGLMYAAPLR*