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scnpilot_solids1_trim150_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_254_trna_1
unknown

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13..87
DNA (75bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_254_trna_2
unknown

Not on your lists

157..227
DNA (71bp)
transferRNA Trp
scnpilot_solids1_trim150_scaffold_254_trna_3
unknown

Not on your lists

241..313
DNA (73bp)
transferRNA Glu
scnpilot_solids1_trim150_scaffold_254_16S_1
unknown

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389..2046
DNA (1658bp)
16S ribosomal RNA (16S rRNA)
scnpilot_solids1_trim150_scaffold_254_1
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

5295..6311
DNA (1017bp) protein (339aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
nad1; NADH dehydrogenase subunit 1; K03878 NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Naegleria gruberi RepID=Q9G8S8_NAEGR rbh
scnpilot_solids1_trim150_scaffold_254_2
Candidatus Carsonella ruddii, Candidatus Carsonella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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6384..8693
DNA (2310bp) protein (770aa)
30S ribosomal protein S7 n=1 Tax=Candidatus Carsonella ruddii CS isolate Thao2000 RepID=J7GSV3_CARRU
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1202537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Zymobacter group; Candidatus Carsonella.;" source="Candidatus Carsonella ruddii CS isolate Thao2000.;"
scnpilot_solids1_trim150_scaffold_254_3
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

8787..10901
DNA (2115bp) protein (705aa)
NADH dehydrogenase subunit 11 {ECO:0000313|EMBL:AJF22892.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AJF22892.1};; Flags: Fragment;; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
hypothetical protein; K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:1.6.5.3 1.6.99.3]
NADH dehydrogenase subunit 11 n=1 Tax=Naegleria gruberi RepID=Q9G8R8_NAEGR rbh
scnpilot_solids1_trim150_scaffold_254_trna_4
unknown

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10933..11005
DNA (73bp)
transferRNA Phe
scnpilot_solids1_trim150_scaffold_254_trna_5
unknown

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11035..11119
DNA (85bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_254_4
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

11177..12133
DNA (957bp) protein (319aa)
Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Naegleria fowleri RepID=M4H678_NAEFO
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
COX3; cytochrome c oxidase subunit III; K02262 cytochrome c oxidase subunit 3
scnpilot_solids1_trim150_scaffold_254_5
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

12247..12861
DNA (615bp) protein (205aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
nad6; NADH dehydrogenase subunit 6; K03884 NADH-ubiquinone oxidoreductase chain 6 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Naegleria gruberi RepID=Q9G8R1_NAEGR
scnpilot_solids1_trim150_scaffold_254_trna_6
unknown

Not on your lists

12900..12977
DNA (78bp)
transferRNA Pseudo
scnpilot_solids1_trim150_scaffold_254_6
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


13094..13858
DNA (765bp) protein (255aa)
Ribosomal protein S2 n=1 Tax=Naegleria gruberi RepID=Q9G8R0_NAEGR
Ribosomal protein S2 {ECO:0000313|EMBL:AAG17794.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
scnpilot_solids1_trim150_scaffold_254_7
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

13926..14780
DNA (855bp) protein (285aa)
ATP synthase F1 subunit gamma {ECO:0000313|EMBL:AAG17791.1}; EC=3.6.1.34 {ECO:0000313|EMBL:AAG17791.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
ATP synthase gamma chain, mitochondrial precursor; K02136 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase F1 subunit gamma n=1 Tax=Naegleria gruberi RepID=Q9G8R3_NAEGR
scnpilot_solids1_trim150_scaffold_254_8
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

14902..15120
DNA (219bp) protein (73aa)
ATPase 9; K02128 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit 9, mitochondrial n=1 Tax=Naegleria gruberi RepID=Q9G8N4_NAEGR
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_solids1_trim150_scaffold_254_9
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

15208..15669
DNA (462bp) protein (154aa)
Orf145 n=1 Tax=Naegleria gruberi RepID=Q9G8R2_NAEGR
Orf145 {ECO:0000313|EMBL:AAG17792.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_solids1_trim150_scaffold_254_10
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

15721..16050
DNA (330bp) protein (110aa)
ATP synthase F0 subunit 8 {ECO:0000313|EMBL:AAG17795.1}; EC=3.6.1.34 {ECO:0000313|EMBL:AAG17795.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
ATP synthase F0 subunit 8 n=1 Tax=Naegleria gruberi RepID=Q9G8Q9_NAEGR
scnpilot_solids1_trim150_scaffold_254_11
unknown

Not on your lists


16063..16713
DNA (651bp) protein (217aa)
scnpilot_solids1_trim150_scaffold_254_12
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

16877..17464
DNA (588bp) protein (196aa)
NADH dehydrogenase subunit 8 {ECO:0000313|EMBL:AJF22922.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AJF22922.1};; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
NADH-quinone oxidoreductase subunit I; K03941 NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:1.6.5.3 1.6.99.3]
NADH dehydrogenase subunit 8 n=1 Tax=Naegleria gruberi RepID=Q9G8R6_NAEGR
scnpilot_solids1_trim150_scaffold_254_13
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

17615..19519
DNA (1905bp) protein (635aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;"
Cox1_2; Cox1_2; K02256 cytochrome c oxidase subunit 1 [EC:1.9.3.1]
Cytochrome c oxidase subunit 1 n=1 Tax=Naegleria fowleri RepID=M4H5I2_NAEFO rbh
scnpilot_solids1_trim150_scaffold_254_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20220..21011
DNA (792bp) protein (264aa)
50S ribosomal protein L2 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL2_AZOBR
rplB; 50S ribosomal subunit protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids1_trim150_scaffold_254_15
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

Not on your lists


21023..21289
DNA (267bp) protein (89aa)
30S ribosomal protein S19 n=1 Tax=Candidatus Sulcia muelleri str. Sulcia-ALF RepID=S5SQU9_9FLAO
rpsS; 30S ribosomal subunit protein S19 (S15e)
Tax=RIFCSPLOWO2_02_FULL_Peregrinibacteria_48_14_curated
scnpilot_solids1_trim150_scaffold_254_16
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


21293..23191
DNA (1899bp) protein (633aa)
Ribosomal protein S3 n=1 Tax=Naegleria gruberi RepID=Q9G8Q4_NAEGR
Ribosomal protein S3 {ECO:0000313|EMBL:AAG17800.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_solids1_trim150_scaffold_254_17
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


23275..23694
DNA (420bp) protein (140aa)
Ribosomal protein L16 n=1 Tax=Naegleria gruberi RepID=Q9G8Q3_NAEGR
Ribosomal protein L16 {ECO:0000313|EMBL:AAG17801.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
scnpilot_solids1_trim150_scaffold_254_18
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


23691..24056
DNA (366bp) protein (122aa)
Ribosomal protein L14 n=1 Tax=Naegleria fowleri RepID=M4H668_NAEFO
Ribosomal protein L14 {ECO:0000313|EMBL:AFP72318.1}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
scnpilot_solids1_trim150_scaffold_254_19
unknown

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24058..24609
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_254_20
Araucaria cunninghamii, Araucaria, Araucariales, Pinidae, Streptophyta, Viridiplantae

Not on your lists

24616..24924
DNA (309bp) protein (103aa)
Ribosomal protein S14 n=1 Tax=Mesostigma viride RepID=G8DKE5_MESVI
Uncharacterized protein {ECO:0000313|EMBL:JAG97701.1}; TaxID=56994 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Araucariales; Araucariaceae; Araucaria.;" source="Araucaria cunninghamii (Hoop pine) (Moreton Bay pine).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_254_21
unknown

Not on your lists

24976..25353
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_254_22
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


25354..25929
DNA (576bp) protein (192aa)
Ribosomal protein L6 n=1 Tax=Polysphondylium pallidum RepID=Q5ILK3_POLPA
Ribosomal protein L6 {ECO:0000313|EMBL:AJF22921.1}; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
scnpilot_solids1_trim150_scaffold_254_23
unknown

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26013..26525
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying items 1-30 of 68 in total

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