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berkeley_reactor_200306_planktonic_scaffold_23420_229

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 275212..276387

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 392.0
  • Bit_score: 407
  • Evalue 1.90e-110
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 384.0
  • Bit_score: 362
  • Evalue 1.40e-97
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLH0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 392.0
  • Bit_score: 407
  • Evalue 1.30e-110

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1176
GTGTGGTTTTTCCTCTTCATTGTCGCGTTAGTCGCGCTGGCCGGCCTCCATTTCTGGTGGCGCGCCCGGTTTCGCGCGCAGCAGCGCCAGCGCGCGGCGGAGATTGAGGCGTCGCGTCAGCGCCAGCAACAAACCGCGGTTGACGCGCAGGCCCAGCAAAAAATCCTGTTCGATTCCATGCTCGAAGGATTGCTGCTGCTCGACCGCGCCAAAAAAATCTACCTGGCCAACCGCGCCTGCAAAAACTTCTTCGGCCTCAAAACCGAACTGCGCGGCAAAACGGTGGTCGAGGCGTTGCGGCTGCACGAACTGGAGGAATTGCTGCAACGCGTCGAATCCGAGAAACAGGTGCTGGACTACGAAATCAAGCTGCCGGGCCTGAGTGAACGCTGGTTCCAGGTGAACGCCGCCGCCATCACCAATTCCGCCGGCGAACGCGAGGGCACCATTCTGGTGTTCCACGACCTGACCCGCCTCAAACAACTCGAACGCCAGCGCGAGGAATTTGTGGCCAACGTGAGCCATGAATTGCGCACGCCGCTGTCGCTGATCAAGGGCTATGTCGAAACCCTGCTGGACGGCGCGCACGCCAATCCCGACGTTTTGCTGCGCTTCCTGAAAACCATCGAGCGCAACGCCAACCGGCTGGATTTGTTGATCCAGGATTTGCTGACGATTTCCGCGCTCGAATCCGGCCGGATGAAACTGAACTGGCAGCCGGTGGATTTGCGCGCGCTGGCGGAACGCGTTTTTCACGATCTCCAGTCCAAGGCGGAAGGCAAGGGCACCCGGCTGGTGTGCGACCTGCCGGCGGCGCTCGTTGCCAGTGGCGACGCGCACCGGCTGGACCAGGTGCTGGCCAACCTGGTGGACAACGCCATCAAATACGGCCGCGCCAACGGCACCGTCGCGGTCGGCGGCCGGAAACTGGAGAACGGCCAGCTTGAGATTTCCGTGCGCGACGACGGTCCCGGCATTCCGGGCGAAGCGCTCGACCGCGTCTTCGAGCGGTTTTATCGCGTGGACAAGGCGCGTTCCCGGGATCAAGGCGGCACCGGCCTGGGACTTTCCATCGTAAAACACATCGTGCAAGCCCACGGCGGCGAAGTGCGGGCGGAAAGTGAATTGGGCAAAGGCGCCACGTTTTTCTTCACCCTGCCCGCAACGCAGTCCTGA
PROTEIN sequence
Length: 392
VWFFLFIVALVALAGLHFWWRARFRAQQRQRAAEIEASRQRQQQTAVDAQAQQKILFDSMLEGLLLLDRAKKIYLANRACKNFFGLKTELRGKTVVEALRLHELEELLQRVESEKQVLDYEIKLPGLSERWFQVNAAAITNSAGEREGTILVFHDLTRLKQLERQREEFVANVSHELRTPLSLIKGYVETLLDGAHANPDVLLRFLKTIERNANRLDLLIQDLLTISALESGRMKLNWQPVDLRALAERVFHDLQSKAEGKGTRLVCDLPAALVASGDAHRLDQVLANLVDNAIKYGRANGTVAVGGRKLENGQLEISVRDDGPGIPGEALDRVFERFYRVDKARSRDQGGTGLGLSIVKHIVQAHGGEVRAESELGKGATFFFTLPATQS*