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berkeley_reactor_200306_planktonic_scaffold_164454

Search features with annotation key words

Displaying items 31-60 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_164454_31
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35319..36053
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003827922
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96294.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
berkeley_reactor_200306_planktonic_scaffold_164454_32
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36166..36816
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7V0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96294.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
berkeley_reactor_200306_planktonic_scaffold_164454_33
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36982..37713
DNA (732bp) protein (244aa)
Protein involved in gliding motility GldF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW8_NIAKG
gliding motility protein GldF
Protein involved in gliding motility GldF {ECO:0000313|EMBL:AEW01866.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_164454_34
unknown

Not on your lists

comp(37822..38658)
DNA (837bp) protein (279aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_35
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38717..39373
DNA (657bp) protein (219aa)
Electron transport protein SCO1/SenC n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG47_CHIPD
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACU58030.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_164454_36
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39394..39741
DNA (348bp) protein (116aa)
Putative pyrophosphatase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FTM4_ECHVK
pyrophosphatase
Putative pyrophosphatase {ECO:0000313|EMBL:AGA76393.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
berkeley_reactor_200306_planktonic_scaffold_164454_37
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39824..40420
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCC3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC93132.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_164454_38
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40518..41291
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U6_NIAKG
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJS04426.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
berkeley_reactor_200306_planktonic_scaffold_164454_39
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41355..41903
DNA (549bp) protein (183aa)
translation initiation factor IF-3 n=1 Tax=Niabella aurantiaca RepID=UPI00036942FC
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
translation initiation factor IF-3
berkeley_reactor_200306_planktonic_scaffold_164454_40
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

42452..43597
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=1763116 bin=GWD2_Bacteroidetes_40_43 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=BJP_IG2102_Bacteroidetes_40_9
berkeley_reactor_200306_planktonic_scaffold_164454_41
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43594..44640)
DNA (1047bp) protein (349aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
tRNA dimethylallyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEG4_CHIPD
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
berkeley_reactor_200306_planktonic_scaffold_164454_42
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44591..45181)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEG5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63374.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_164454_43
unknown

Not on your lists

45352..45690
DNA (339bp) protein (113aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_44
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45777..48101
DNA (2325bp) protein (775aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEZ9_SPHS2
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADZ79100.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
berkeley_reactor_200306_planktonic_scaffold_164454_45
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48156..48728
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAQ2_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ79099.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
berkeley_reactor_200306_planktonic_scaffold_164454_46
unknown

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49323..49547
DNA (225bp) protein (75aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_47
unknown

Not on your lists

49738..49977
DNA (240bp) protein (80aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_48
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50046..51086)
DNA (1041bp) protein (347aa)
glycosyl transferase n=1 Tax=Cytophaga aurantiaca RepID=UPI00037F6906
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AKD02028.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
berkeley_reactor_200306_planktonic_scaffold_164454_49
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(51127..51969)
DNA (843bp) protein (281aa)
metallophosphoesterase (EC:3.6.1.-)
Metallophosphoesterase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4C5_ZOBGA
Phosphoesterase {ECO:0000313|EMBL:KIF30100.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
berkeley_reactor_200306_planktonic_scaffold_164454_50
unknown

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comp(52192..52905)
DNA (714bp) protein (238aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_51
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52993..54135)
DNA (1143bp) protein (381aa)
Aminotransferase class I and II n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJT5_CHIPD
Aminotransferase {ECO:0000313|EMBL:KIC90960.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
class I and II aminotransferase
berkeley_reactor_200306_planktonic_scaffold_164454_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54184..54564)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMJ3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01981.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_164454_53
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54611..55576)
DNA (966bp) protein (322aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RU70_LEAB4
ATPase AAA {ECO:0000313|EMBL:KGL63004.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
ATPase associated with various cellular activities aaa_3
berkeley_reactor_200306_planktonic_scaffold_164454_54
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55731..56852)
DNA (1122bp) protein (374aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D3774
menaquinone biosynthesis protein, SCO4550 family
berkeley_reactor_200306_planktonic_scaffold_164454_55
unknown

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57228..57560
DNA (333bp) protein (111aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_164454_56
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57652..58632
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000372CCB2
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
berkeley_reactor_200306_planktonic_scaffold_164454_trna_1
unknown

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58699..58769
DNA (71bp)
transferRNA His
berkeley_reactor_200306_planktonic_scaffold_164454_trna_2
unknown

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58811..58895
DNA (85bp)
transferRNA Ser
berkeley_reactor_200306_planktonic_scaffold_164454_trna_3
unknown

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59053..59123
DNA (71bp)
transferRNA His
berkeley_reactor_200306_planktonic_scaffold_164454_trna_4
unknown

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59165..59249
DNA (85bp)
transferRNA Ser
Displaying items 31-60 of 191 in total

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