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BD02T64_Gammaproteobacteria_43_32_partial

BD02T64_Gammaproteobacteria_43_32
In projects: BD02T64

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: BD02T64_UNK

Properties

Avg. coverage: 31.56 Longest contig: 143.32 Kbp Bin length: 5.49 Mbp GC content: 42.91 %
Contigs count: 205 Features count: 4776 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 MC: 2 BSCG 26 / 51 MC: 3 ASCG 11 / 38 MC: 2
Displaying items 51-100 of 205 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
BD02T64_scaffold_2310
Class: Gammaproteobacteria (68.18%)
22 20121 bp 41.67 32.62 88.00
BD02T64_scaffold_3097
Class: Gammaproteobacteria (50%)
14 14705 bp 41.96 32.61 91.74
BD02T64_scaffold_1701
Class: Gammaproteobacteria (76.19%)
21 24564 bp 42.63 32.57 90.79
BD02T64_scaffold_5718
Class: Gammaproteobacteria (77.78%)
9 7837 bp 42.64 32.52 84.71
BD02T64_scaffold_620
Class: Gammaproteobacteria (76.74%)
43 56273 bp 42.88 32.46 91.69
BD02T64_scaffold_366
Class: Gammaproteobacteria (96.67%)
60 67327 bp 43.38 32.46 89.92
BD02T64_scaffold_909
Class: Gammaproteobacteria (76.32%)
38 39112 bp 42.83 32.45 84.51
BD02T64_scaffold_364
Class: Gammaproteobacteria (57.75%)
71 80844 bp 41.93 32.43 86.18
BD02T64_scaffold_1430
Class: Gammaproteobacteria (72.73%)
33 37906 bp 42.65 32.41 88.95
BD02T64_scaffold_18050
Class: Gammaproteobacteria (66.67%)
3 2240 bp 41.47 32.41 85.31
BD02T64_scaffold_3125
Class: Gammaproteobacteria (90.48%)
21 26582 bp 41.53 32.40 89.95
BD02T64_scaffold_4105
Order: Alteromonadales (50%)
16 15087 bp 42.96 32.37 82.34
BD02T64_scaffold_3264
Class: Gammaproteobacteria (92.86%)
14 13982 bp 42.86 32.36 88.96
BD02T64_scaffold_951
Class: Gammaproteobacteria (68.42%)
38 38039 bp 42.74 32.34 87.88
BD02T64_scaffold_709
Class: Gammaproteobacteria (58.7%)
46 45003 bp 43.29 32.33 85.88
BD02T64_scaffold_1111
Class: Gammaproteobacteria (84.06%)
69 72558 bp 42.94 32.33 89.67
BD02T64_scaffold_5045
Class: Gammaproteobacteria (66.67%)
9 8957 bp 43.42 32.32 91.87
BD02T64_scaffold_365
Class: Gammaproteobacteria (87.1%)
62 67434 bp 43.07 32.30 91.13
BD02T64_scaffold_608
Class: Gammaproteobacteria (70.77%)
130 137423 bp 42.25 32.27 85.97
BD02T64_scaffold_1718
Class: Gammaproteobacteria (90.91%)
11 24392 bp 42.13 32.21 94.99
BD02T64_scaffold_3710
Class: Gammaproteobacteria (72.73%)
11 12349 bp 43.98 32.20 95.59
BD02T64_scaffold_4496
Class: Gammaproteobacteria (87.5%)
8 10100 bp 43.26 32.15 87.86
BD02T64_scaffold_850
Class: Gammaproteobacteria (95.24%)
42 40781 bp 43.49 32.13 88.96
BD02T64_scaffold_875
Class: Gammaproteobacteria (68.57%)
35 40119 bp 43.03 32.13 91.85
BD02T64_scaffold_1169
Class: Gammaproteobacteria (61.11%)
36 42445 bp 41.35 32.09 89.74
BD02T64_scaffold_292
Class: Gammaproteobacteria (80.82%)
73 79217 bp 43.37 32.09 88.30
BD02T64_scaffold_1433
Class: Gammaproteobacteria (59.26%)
27 27922 bp 42.83 32.08 88.40
BD02T64_scaffold_452
Class: Gammaproteobacteria (87%)
46 60202 bp 44.44 32.07 92.85
BD02T64_scaffold_6520
Class: Gammaproteobacteria (70%)
10 6834 bp 43.77 32.07 90.39
BD02T64_scaffold_1529
Class: Gammaproteobacteria (72%)
25 26885 bp 42.73 32.06 89.49
BD02T64_scaffold_678
Class: Gammaproteobacteria (85.42%)
48 58886 bp 43.01 32.06 88.22
BD02T64_scaffold_1272
Class: Gammaproteobacteria (79.17%)
24 30773 bp 43.76 32.05 92.09
BD02T64_scaffold_5264
Phylum: Proteobacteria (85.71%)
7 8557 bp 43.94 32.04 76.81
BD02T64_scaffold_10360
Class: Gammaproteobacteria (60%)
5 6116 bp 42.15 32.03 92.90
BD02T64_scaffold_4195
Class: Gammaproteobacteria (75%)
20 20062 bp 43.65 32.03 88.50
BD02T64_scaffold_856
Class: Gammaproteobacteria (79.17%)
48 57214 bp 42.67 32.02 91.25
BD02T64_scaffold_236
Class: Gammaproteobacteria (72.5%)
120 124710 bp 42.93 32.01 89.68
BD02T64_scaffold_4615
Class: Gammaproteobacteria (69.23%)
26 20266 bp 43.03 31.98 86.67
BD02T64_scaffold_2946
Class: Gammaproteobacteria (83.33%)
24 25030 bp 43.23 31.94 85.10
BD02T64_scaffold_8953
Class: Gammaproteobacteria (57.14%)
7 8301 bp 40.56 31.93 87.86
BD02T64_scaffold_7168
Class: Gammaproteobacteria (75%)
8 6846 bp 41.19 31.92 88.52
BD02T64_scaffold_583
Class: Gammaproteobacteria (81.4%)
43 51258 bp 43.66 31.89 92.20
BD02T64_scaffold_1698
Class: Gammaproteobacteria (70%)
20 26835 bp 41.21 31.87 89.41
BD02T64_scaffold_1603
Class: Gammaproteobacteria (80.77%)
26 25676 bp 41.94 31.87 84.07
BD02T64_scaffold_10830
Class: Gammaproteobacteria (66.67%)
3 3923 bp 43.08 31.85 95.97
BD02T64_scaffold_1591
Class: Gammaproteobacteria (66.67%)
27 25796 bp 43.22 31.84 93.40
BD02T64_scaffold_3679
Class: Gammaproteobacteria (63.64%)
11 18604 bp 42.10 31.84 93.63
BD02T64_scaffold_5630
Class: Gammaproteobacteria (100%)
5 7968 bp 45.54 31.83 96.42
BD02T64_scaffold_305
Class: Gammaproteobacteria (79.69%)
64 76564 bp 42.88 31.83 89.99
BD02T64_scaffold_2316
Class: Gammaproteobacteria (78.13%)
32 36397 bp 43.88 31.82 87.61
Displaying items 51-100 of 205 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.