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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 51-100 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_10033 PHE14_166
Order: Caulobacterales (80%)
5 6296 bp 70.98 14.72 95.63
cn_combo_scaffold_5815 PHE14_74
Order: Caulobacterales (60%)
20 20395 bp 69.33 14.72 88.08
cn_combo_scaffold_4629 PHE14_50
Class: Alphaproteobacteria (76.92%)
13 12711 bp 70.76 14.71 95.28
cn_combo_scaffold_5586 PHE14_66
Order: Caulobacterales (80%)
15 13341 bp 70.20 14.71 94.31
cn_combo_scaffold_6978 PHE14_106
Order: Caulobacterales (90.91%)
11 8758 bp 69.92 14.71 88.24
cn_combo_scaffold_8169 PHE14_133
Order: Caulobacterales (90.91%)
11 9922 bp 69.95 14.71 96.24
cn_combo_scaffold_4847 PHE14_57
Order: Caulobacterales (71.43%)
14 12143 bp 70.68 14.68 91.44
cn_combo_scaffold_5715 PHE14_70
Species: Phenylobacterium zucineum (50%)
14 10445 bp 69.63 14.66 96.02
cn_combo_scaffold_5787 PHE14_71
Order: Caulobacterales (86.67%)
15 10872 bp 71.02 14.66 91.00
cn_combo_scaffold_6060 PHE14_85
Order: Caulobacterales (91.67%)
12 13863 bp 69.34 14.64 92.73
cn_combo_scaffold_7592 PHE14_120
Order: Caulobacterales (75%)
12 11096 bp 69.78 14.64 91.71
cn_combo_scaffold_5628 PHE14_67
Order: Caulobacterales (88.89%)
9 10590 bp 69.89 14.63 94.59
cn_combo_scaffold_12148 PHE14_246
Order: Caulobacterales (57.14%)
7 5252 bp 70.13 14.62 95.51
cn_combo_scaffold_2724 PHE14_19
Class: Alphaproteobacteria (89.47%)
19 20568 bp 69.78 14.62 91.47
cn_combo_scaffold_5957 PHE14_81
Order: Caulobacterales (57.14%)
14 10061 bp 69.64 14.61 90.38
cn_combo_scaffold_6312 PHE14_91
Order: Caulobacterales (75%)
8 9567 bp 72.39 14.61 95.77
cn_combo_scaffold_3423 PHE14_28
Order: Caulobacterales (89.47%)
19 16824 bp 69.38 14.60 90.80
cn_combo_scaffold_5844 PHE14_75
Order: Caulobacterales (100%)
11 10247 bp 67.42 14.60 89.38
cn_combo_scaffold_6381 PHE14_95
Order: Caulobacterales (80%)
15 9475 bp 69.42 14.60 88.56
cn_combo_scaffold_12565 PHE14_218
Species: Caulobacter sp. AP07 (66.67%)
6 5098 bp 71.64 14.59 96.98
cn_combo_scaffold_6229 PHE14_89
Order: Caulobacterales (85.71%)
7 9676 bp 69.74 14.57 87.77
cn_combo_scaffold_7310 PHE14_113
Order: Caulobacterales (100%)
9 8388 bp 68.91 14.57 92.20
cn_combo_scaffold_15877 PHE14_223
Order: Caulobacterales (60%)
10 6231 bp 71.14 14.56 85.12
cn_combo_scaffold_10940 PHE14_186
Species: R_Phenylobacterium_70_10 (50%)
6 5797 bp 67.24 14.54 94.65
cn_combo_scaffold_1690 PHE14_3
Order: Caulobacterales (92.86%)
28 32853 bp 69.42 14.54 93.03
cn_combo_scaffold_6405 PHE14_96
Order: Caulobacterales (90.91%)
11 9435 bp 70.84 14.54 93.42
cn_combo_scaffold_7234 PHE14_111
Order: Caulobacterales (83.33%)
6 8469 bp 69.11 14.54 91.04
cn_combo_scaffold_9789 PHE14_161
Species: Phenylobacterium zucineum (50%)
10 6444 bp 68.65 14.53 90.74
cn_combo_scaffold_11844 PHE14_205
Order: Caulobacterales (87.5%)
8 5382 bp 65.27 14.53 88.78
cn_combo_scaffold_2638 PHE14_18
Order: Caulobacterales (100%)
23 23042 bp 69.95 14.52 89.47
cn_combo_scaffold_3313 PHE14_26
Order: Caulobacterales (84.62%)
26 28945 bp 70.14 14.47 89.94
cn_combo_scaffold_10355 PHE14_172
Order: Caulobacterales (100%)
6 6112 bp 71.48 14.45 85.16
cn_combo_scaffold_11044 PHE14_189
Order: Caulobacterales (100%)
6 5752 bp 70.76 14.45 90.13
cn_combo_scaffold_12029 PHE14_209
Order: Caulobacterales (80%)
5 5300 bp 69.92 14.45 90.51
cn_combo_scaffold_4336 PHE14_42
Order: Caulobacterales (76.92%)
13 13485 bp 70.73 14.45 91.50
cn_combo_scaffold_4592 PHE14_48
Order: Caulobacterales (100%)
18 13938 bp 69.90 14.45 90.98
cn_combo_scaffold_7088 PHE14_107
Order: Caulobacterales (80%)
10 8616 bp 70.24 14.44 89.28
cn_combo_scaffold_2165 PHE14_9
Order: Caulobacterales (68.97%)
29 25241 bp 69.17 14.42 88.86
cn_combo_scaffold_12352 PHE14_214
Species: Phenylobacterium zucineum (50%)
6 5175 bp 68.97 14.40 91.30
cn_combo_scaffold_4186 PHE14_38
Order: Caulobacterales (100%)
14 13976 bp 70.47 14.40 95.86
cn_combo_scaffold_2136 PHE14_8
Order: Caulobacterales (86.67%)
30 28047 bp 70.36 14.39 92.08
cn_combo_scaffold_7174 PHE14_109
Order: Caulobacterales (100%)
9 8522 bp 67.60 14.39 90.19
cn_combo_scaffold_12052 PHE14_211
Order: Caulobacterales (100%)
5 5291 bp 72.75 14.33 99.34
cn_combo_scaffold_3874 PHE14_34
Order: Caulobacterales (85%)
20 17335 bp 70.15 14.32 92.17
cn_combo_scaffold_9550 PHE14_152
Order: Caulobacterales (71.43%)
7 7099 bp 69.46 14.30 93.18
cn_combo_scaffold_6333 PHE14_93
Order: Caulobacterales (95.65%)
23 17939 bp 68.73 14.28 90.45
cn_combo_scaffold_12426 PHE14_216
Species: Sphingopyxis sp. LC81 (100%)
1 5153 bp 64.02 14.26 96.47
cn_combo_scaffold_5337 PHE14_62
Species: R_Phenylobacterium_69_31 (55.56%)
9 11082 bp 69.77 14.26 95.70
cn_combo_scaffold_4183 PHE14_36
Species: R_Phenylobacterium_70_10 (50%)
16 13984 bp 70.22 14.25 88.34
cn_combo_scaffold_6029 PHE14_84
Order: Caulobacterales (92.86%)
14 13386 bp 69.74 14.25 89.76
Displaying items 51-100 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.