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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_12774 PHE14_219
Order: Caulobacterales (60%)
5 5026 bp 68.44 14.03 91.98
cn_combo_scaffold_24413 PHE14_228
Order: Caulobacterales (100%)
7 5067 bp 70.46 15.22 92.07
cn_combo_scaffold_12565 PHE14_218
Species: Caulobacter sp. AP07 (66.67%)
6 5098 bp 71.64 14.59 96.98
cn_combo_scaffold_12514 PHE14_217
Order: Caulobacterales (50%)
8 5117 bp 71.39 11.86 93.10
cn_combo_scaffold_12426 PHE14_216
Species: Sphingopyxis sp. LC81 (100%)
1 5153 bp 64.02 14.26 96.47
cn_combo_scaffold_12352 PHE14_214
Species: Phenylobacterium zucineum (50%)
6 5175 bp 68.97 14.40 91.30
cn_combo_scaffold_12284 PHE14_242
Species: Candidatus Phaeomarinobacter ectocarpi (50%)
4 5203 bp 70.88 10.32 99.98
cn_combo_scaffold_12165 PHE14_247
Class: Alphaproteobacteria (100%)
6 5247 bp 69.60 14.16 92.34
cn_combo_scaffold_12148 PHE14_246
Order: Caulobacterales (57.14%)
7 5252 bp 70.13 14.62 95.51
cn_combo_scaffold_12082 PHE14_213
Species: Caulobacter sp. AP07 (71.43%)
7 5279 bp 66.93 9.36 89.96
cn_combo_scaffold_12074 PHE14_212
Species: Caulobacter sp. K31 (100%)
7 5283 bp 65.08 11.87 94.44
cn_combo_scaffold_12052 PHE14_211
Order: Caulobacterales (100%)
5 5291 bp 72.75 14.33 99.34
cn_combo_scaffold_12053 PHE14_241
Order: Caulobacterales (50%)
6 5291 bp 69.40 12.98 91.12
cn_combo_scaffold_12029 PHE14_209
Order: Caulobacterales (80%)
5 5300 bp 69.92 14.45 90.51
cn_combo_scaffold_12014 PHE14_230
Order: Caulobacterales (55.56%)
9 5305 bp 70.03 12.74 91.89
cn_combo_scaffold_18632 PHE14_227
Species: Brevundimonas diminuta (66.67%)
9 5328 bp 66.08 8.15 82.41
cn_combo_scaffold_11952 PHE14_207
Species: Brevundimonas diminuta (100%)
5 5334 bp 69.01 9.17 93.48
cn_combo_scaffold_11872 PHE14_206
Order: Caulobacterales (100%)
7 5368 bp 68.44 13.84 90.15
cn_combo_scaffold_11844 PHE14_205
Order: Caulobacterales (87.5%)
8 5382 bp 65.27 14.53 88.78
cn_combo_scaffold_11825 PHE14_204
Species: Phenylobacterium zucineum (60%)
5 5389 bp 68.88 13.92 95.47
cn_combo_scaffold_11789 PHE14_203
Species: R_Phenylobacterium_70_10 (50%)
8 5406 bp 66.26 15.50 86.90
cn_combo_scaffold_11720 PHE14_202
Species: R_Phenylobacterium_70_10 (66.67%)
6 5433 bp 71.16 16.58 84.65
cn_combo_scaffold_11655 PHE14_200
Species: Brevundimonas diminuta (100%)
5 5461 bp 67.26 9.91 95.86
cn_combo_scaffold_11629 PHE14_199
Species: R_Phenylobacterium_69_31 (50%)
6 5475 bp 70.41 12.29 95.07
cn_combo_scaffold_11610 PHE14_240
Species: R_Phenylobacterium_69_31 (50%)
8 5484 bp 71.28 13.89 89.72
cn_combo_scaffold_11582 PHE14_197
Species: R_Phenylobacterium_69_31 (50%)
6 5496 bp 62.34 11.06 83.84
cn_combo_scaffold_11529 PHE14_196
Order: Caulobacterales (50%)
6 5517 bp 69.53 12.80 87.98
cn_combo_scaffold_11475 PHE14_245
Class: Alphaproteobacteria (77.78%)
9 5544 bp 69.39 13.58 91.34
cn_combo_scaffold_11425 PHE14_195
Order: Caulobacterales (71.43%)
7 5574 bp 69.38 12.41 92.68
cn_combo_scaffold_11164 PHE14_193
Species: Brevundimonas diminuta (87.5%)
8 5693 bp 63.36 8.80 90.06
cn_combo_scaffold_11140 PHE14_191
Order: Caulobacterales (100%)
7 5704 bp 69.35 13.13 93.78
cn_combo_scaffold_11060 PHE14_190
Order: Caulobacterales (77.78%)
9 5745 bp 68.41 13.32 92.06
cn_combo_scaffold_11044 PHE14_189
Order: Caulobacterales (100%)
6 5752 bp 70.76 14.45 90.13
cn_combo_scaffold_11008 PHE14_188
Species: R_Phenylobacterium_70_10 (50%)
6 5762 bp 73.12 15.05 97.41
cn_combo_scaffold_11001 PHE14_244
Class: Alphaproteobacteria (60%)
5 5765 bp 71.10 12.40 97.10
cn_combo_scaffold_11000 PHE14_187
Order: Caulobacterales (60%)
5 5766 bp 71.33 14.07 98.23
cn_combo_scaffold_17969 PHE14_226
Species: Brevundimonas diminuta (100%)
7 5780 bp 67.51 9.98 93.17
cn_combo_scaffold_10940 PHE14_186
Species: R_Phenylobacterium_70_10 (50%)
6 5797 bp 67.24 14.54 94.65
cn_combo_scaffold_10894 PHE14_185
Order: Caulobacterales (80%)
5 5818 bp 66.40 14.83 80.85
cn_combo_scaffold_10710 PHE14_184
Species: Brevundimonas diminuta (50%)
10 5916 bp 63.76 10.63 91.89
cn_combo_scaffold_10671 PHE14_239
Class: Alphaproteobacteria (57.14%)
7 5937 bp 71.47 13.69 98.48
cn_combo_scaffold_10662 PHE14_183
Order: Caulobacterales (60%)
5 5945 bp 71.46 13.56 94.87
cn_combo_scaffold_17196 PHE14_225
Species: R_Phenylobacterium_70_10 (57.14%)
7 5999 bp 69.86 13.79 97.12
cn_combo_scaffold_10557 PHE14_180
Order: Caulobacterales (100%)
7 6001 bp 70.60 13.63 93.98
cn_combo_scaffold_10555 PHE14_181
Order: Caulobacterales (57.14%)
7 6001 bp 69.67 13.73 95.28
cn_combo_scaffold_10530 PHE14_179
Species: Phenylobacterium zucineum (50%)
4 6019 bp 70.14 15.53 93.45
cn_combo_scaffold_10521 PHE14_178
Order: Caulobacterales (57.14%)
7 6022 bp 70.52 15.00 93.86
cn_combo_scaffold_10515 PHE14_177
Order: Caulobacterales (85.71%)
7 6026 bp 70.46 14.84 93.94
cn_combo_scaffold_10448 PHE14_175
Order: Caulobacterales (66.67%)
6 6061 bp 69.96 13.31 96.47
cn_combo_scaffold_10402 PHE14_174
Species: R_Phenylobacterium_70_10 (50%)
6 6084 bp 69.51 14.23 91.32
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.