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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_7438 PHE14_117
Species: Sphingopyxis sp. MC1 (50%)
6 8270 bp 60.18 19.23 83.33
cn_combo_scaffold_6654 PHE14_100
Order: Caulobacterales (80%)
10 9132 bp 69.57 16.95 91.62
cn_combo_scaffold_11720 PHE14_202
Species: R_Phenylobacterium_70_10 (66.67%)
6 5433 bp 71.16 16.58 84.65
cn_combo_scaffold_5307 PHE14_60
Order: Caulobacterales (78.57%)
14 11142 bp 67.43 16.22 86.73
cn_combo_scaffold_11153 PHE14_192
Order: Caulobacterales (88.89%)
9 7352 bp 68.02 16.17 91.40
cn_combo_scaffold_8038 PHE14_129
Order: Caulobacterales (100%)
8 7738 bp 68.13 15.86 84.05
cn_combo_scaffold_10065 PHE14_167
Order: Caulobacterales (60%)
5 6287 bp 71.40 15.84 93.34
cn_combo_scaffold_9324 PHE14_149
Species: Phenylobacterium zucineum (50%)
6 6729 bp 68.17 15.78 83.24
cn_combo_scaffold_7460 PHE14_235
Order: Caulobacterales (57.14%)
7 8254 bp 71.07 15.73 94.10
cn_combo_scaffold_5970 PHE14_82
Order: Caulobacterales (87.5%)
16 10040 bp 69.25 15.61 90.57
cn_combo_scaffold_10587 PHE14_182
Order: Caulobacterales (100%)
8 10271 bp 68.82 15.60 95.57
cn_combo_scaffold_6213 PHE14_88
Order: Caulobacterales (70%)
10 9700 bp 67.91 15.59 87.59
cn_combo_scaffold_10530 PHE14_179
Species: Phenylobacterium zucineum (50%)
4 6019 bp 70.14 15.53 93.45
cn_combo_scaffold_11789 PHE14_203
Species: R_Phenylobacterium_70_10 (50%)
8 5406 bp 66.26 15.50 86.90
cn_combo_scaffold_7425 PHE14_116
Species: Phenylobacterium zucineum (75%)
8 8285 bp 68.55 15.47 94.33
cn_combo_scaffold_10363 PHE14_173
Order: Caulobacterales (88.89%)
9 6108 bp 68.61 15.42 88.26
cn_combo_scaffold_4829 PHE14_55
Order: Caulobacterales (66.67%)
12 12185 bp 69.01 15.41 94.20
cn_combo_scaffold_7123 PHE14_108
Order: Caulobacterales (90%)
10 8579 bp 69.54 15.40 90.43
cn_combo_scaffold_6686 PHE14_102
Order: Caulobacterales (83.33%)
12 9104 bp 70.44 15.34 85.08
cn_combo_scaffold_2304 PHE14_11
Order: Caulobacterales (95.83%)
24 23711 bp 69.70 15.31 94.60
cn_combo_scaffold_6282 PHE14_90
Order: Caulobacterales (100%)
20 9601 bp 65.90 15.31 94.43
cn_combo_scaffold_5582 PHE14_65
Order: Caulobacterales (92.31%)
13 13674 bp 70.23 15.30 89.07
cn_combo_scaffold_6889 PHE14_105
Order: Caulobacterales (81.25%)
16 15761 bp 70.23 15.23 84.28
cn_combo_scaffold_24413 PHE14_228
Order: Caulobacterales (100%)
7 5067 bp 70.46 15.22 92.07
cn_combo_scaffold_5082 PHE14_59
Order: Caulobacterales (80%)
15 14063 bp 69.17 15.20 90.32
cn_combo_scaffold_3151 PHE14_231
Class: Alphaproteobacteria (88.89%)
18 18107 bp 69.55 15.16 91.39
cn_combo_scaffold_3250 PHE14_25
Order: Caulobacterales (80%)
15 17605 bp 69.36 15.14 95.48
cn_combo_scaffold_7835 PHE14_125
Order: Caulobacterales (90%)
10 7904 bp 68.72 15.11 96.10
cn_combo_scaffold_7614 PHE14_121
Species: R_Phenylobacterium_70_10 (55.56%)
9 8105 bp 66.47 15.10 97.61
cn_combo_scaffold_4244 PHE14_40
Order: Caulobacterales (100%)
17 13795 bp 70.15 15.06 88.31
cn_combo_scaffold_11008 PHE14_188
Species: R_Phenylobacterium_70_10 (50%)
6 5762 bp 73.12 15.05 97.41
cn_combo_scaffold_8873 PHE14_140
Species: Phenylobacterium zucineum (66.67%)
6 7082 bp 70.46 15.02 93.19
cn_combo_scaffold_4222 PHE14_39
Order: Caulobacterales (91.67%)
24 23513 bp 70.67 15.02 93.13
cn_combo_scaffold_1220 PHE14_1
Order: Caulobacterales (62.22%)
45 40951 bp 69.57 15.01 92.61
cn_combo_scaffold_10521 PHE14_178
Order: Caulobacterales (57.14%)
7 6022 bp 70.52 15.00 93.86
cn_combo_scaffold_6328 PHE14_92
Order: Caulobacterales (81.82%)
11 9546 bp 70.23 14.98 91.86
cn_combo_scaffold_6740 PHE14_103
Order: Caulobacterales (100%)
9 9032 bp 69.28 14.98 90.58
cn_combo_scaffold_10243 PHE14_170
Species: R_Phenylobacterium_70_10 (66.67%)
6 6187 bp 70.50 14.97 92.27
cn_combo_scaffold_5819 PHE14_73
Order: Caulobacterales (66.67%)
9 10283 bp 67.85 14.96 94.32
cn_combo_scaffold_11682 PHE14_201
Order: Caulobacterales (87.5%)
8 8166 bp 70.81 14.95 86.33
cn_combo_scaffold_4167 PHE14_37
Order: Caulobacterales (78.57%)
28 25115 bp 69.56 14.92 91.25
cn_combo_scaffold_6147 PHE14_86
Order: Caulobacterales (61.54%)
13 9803 bp 70.13 14.90 95.66
cn_combo_scaffold_2328 PHE14_12
Order: Caulobacterales (77.27%)
22 25243 bp 71.10 14.89 94.98
cn_combo_scaffold_9673 PHE14_157
Order: Caulobacterales (100%)
6 6511 bp 71.77 14.88 94.46
cn_combo_scaffold_10515 PHE14_177
Order: Caulobacterales (85.71%)
7 6026 bp 70.46 14.84 93.94
cn_combo_scaffold_10894 PHE14_185
Order: Caulobacterales (80%)
5 5818 bp 66.40 14.83 80.85
cn_combo_scaffold_1755 PHE14_4
Order: Caulobacterales (70.97%)
31 30447 bp 70.28 14.83 91.53
cn_combo_scaffold_2013 PHE14_6
Species: Phenylobacterium zucineum (50%)
28 27148 bp 69.91 14.82 90.71
cn_combo_scaffold_4670 PHE14_53
Order: Caulobacterales (80%)
20 19838 bp 69.65 14.80 92.19
cn_combo_scaffold_4465 PHE14_43
Order: Caulobacterales (88.24%)
17 13150 bp 69.25 14.76 94.27
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.