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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_18632 PHE14_227
Species: Brevundimonas diminuta (66.67%)
9 5328 bp 66.08 8.15 82.41
cn_combo_scaffold_8969 PHE14_145
Order: Sphingomonadales (50%)
6 7017 bp 63.47 8.41 83.45
cn_combo_scaffold_11164 PHE14_193
Species: Brevundimonas diminuta (87.5%)
8 5693 bp 63.36 8.80 90.06
cn_combo_scaffold_9625 PHE14_155
Species: Brevundimonas diminuta (80%)
5 6535 bp 68.45 8.84 97.69
cn_combo_scaffold_9400 PHE14_151
Species: R_Phenylobacterium_69_31 (66.67%)
6 6681 bp 65.11 9.04 89.72
cn_combo_scaffold_11952 PHE14_207
Species: Brevundimonas diminuta (100%)
5 5334 bp 69.01 9.17 93.48
cn_combo_scaffold_6749 PHE14_104
Genus: Caulobacter (50%)
8 9021 bp 62.02 9.33 89.16
cn_combo_scaffold_12082 PHE14_213
Species: Caulobacter sp. AP07 (71.43%)
7 5279 bp 66.93 9.36 89.96
cn_combo_scaffold_11655 PHE14_200
Species: Brevundimonas diminuta (100%)
5 5461 bp 67.26 9.91 95.86
cn_combo_scaffold_17969 PHE14_226
Species: Brevundimonas diminuta (100%)
7 5780 bp 67.51 9.98 93.17
cn_combo_scaffold_6142 PHE14_87
Order: Caulobacterales (61.11%)
18 14442 bp 63.58 10.25 67.66
cn_combo_scaffold_5811 PHE14_232
Genus: Sphingobium (57.14%)
7 10299 bp 68.83 10.27 99.33
cn_combo_scaffold_12284 PHE14_242
Species: Candidatus Phaeomarinobacter ectocarpi (50%)
4 5203 bp 70.88 10.32 99.98
cn_combo_scaffold_10128 PHE14_169
Species: R_Phenylobacterium_70_10 (50%)
4 6249 bp 68.52 10.37 93.86
cn_combo_scaffold_7773 PHE14_124
Class: Alphaproteobacteria (66.67%)
6 7959 bp 64.44 10.53 87.26
cn_combo_scaffold_7545 PHE14_229
Phylum: Proteobacteria (57.14%)
7 8163 bp 68.49 10.56 83.09
cn_combo_scaffold_10710 PHE14_184
Species: Brevundimonas diminuta (50%)
10 5916 bp 63.76 10.63 91.89
cn_combo_scaffold_12915 PHE14_243
Order: Caulobacterales (53.85%)
13 7857 bp 66.48 10.83 90.11
cn_combo_scaffold_8944 PHE14_144
Class: Alphaproteobacteria (100%)
9 7037 bp 67.57 10.84 86.29
cn_combo_scaffold_7680 PHE14_122
Species: Caulobacter sp. K31 (80%)
5 8030 bp 62.08 10.93 99.53
cn_combo_scaffold_11582 PHE14_197
Species: R_Phenylobacterium_69_31 (50%)
6 5496 bp 62.34 11.06 83.84
cn_combo_scaffold_4597 PHE14_47
Order: Caulobacterales (52.94%)
17 13208 bp 66.70 11.35 90.38
cn_combo_scaffold_10469 PHE14_176
Order: Caulobacterales (70%)
10 6998 bp 67.79 11.43 92.13
cn_combo_scaffold_11352 PHE14_194
Species: Caulobacter sp. K31 (66.67%)
9 7258 bp 68.08 11.52 88.12
cn_combo_scaffold_9747 PHE14_159
Species: Phenylobacterium zucineum (50%)
6 6471 bp 62.28 11.53 83.59
cn_combo_scaffold_8218 PHE14_236
Class: Alphaproteobacteria (70%)
10 7583 bp 66.79 11.78 86.36
cn_combo_scaffold_4600 PHE14_49
Order: Caulobacterales (50%)
12 13308 bp 65.97 11.79 88.83
cn_combo_scaffold_12514 PHE14_217
Order: Caulobacterales (50%)
8 5117 bp 71.39 11.86 93.10
cn_combo_scaffold_12074 PHE14_212
Species: Caulobacter sp. K31 (100%)
7 5283 bp 65.08 11.87 94.44
cn_combo_scaffold_10103 PHE14_168
Order: Caulobacterales (50%)
8 6267 bp 70.02 11.97 92.63
cn_combo_scaffold_9939 PHE14_164
Genus: Caulobacter (100%)
5 6353 bp 68.82 12.21 92.22
cn_combo_scaffold_8913 PHE14_142
Species: R_Phenylobacterium_70_10 (50%)
8 7056 bp 69.05 12.29 90.01
cn_combo_scaffold_11629 PHE14_199
Species: R_Phenylobacterium_69_31 (50%)
6 5475 bp 70.41 12.29 95.07
cn_combo_scaffold_11001 PHE14_244
Class: Alphaproteobacteria (60%)
5 5765 bp 71.10 12.40 97.10
cn_combo_scaffold_11425 PHE14_195
Order: Caulobacterales (71.43%)
7 5574 bp 69.38 12.41 92.68
cn_combo_scaffold_11575 PHE14_198
Class: Alphaproteobacteria (77.78%)
9 6201 bp 69.39 12.58 85.55
cn_combo_scaffold_5506 PHE14_63
Order: Caulobacterales (78.57%)
14 10803 bp 67.23 12.61 87.92
cn_combo_scaffold_4576 PHE14_46
Order: Caulobacterales (52.63%)
19 12863 bp 67.08 12.67 88.49
cn_combo_scaffold_4637 PHE14_51
Order: Caulobacterales (90.91%)
11 13319 bp 67.35 12.68 81.65
cn_combo_scaffold_12014 PHE14_230
Order: Caulobacterales (55.56%)
9 5305 bp 70.03 12.74 91.89
cn_combo_scaffold_9656 PHE14_156
Order: Caulobacterales (57.14%)
7 6521 bp 67.90 12.76 85.68
cn_combo_scaffold_4837 PHE14_56
Order: Caulobacterales (84.62%)
13 12172 bp 68.37 12.78 93.34
cn_combo_scaffold_11529 PHE14_196
Order: Caulobacterales (50%)
6 5517 bp 69.53 12.80 87.98
cn_combo_scaffold_8905 PHE14_141
Order: Caulobacterales (90%)
10 7061 bp 68.67 12.90 95.13
cn_combo_scaffold_7610 PHE14_119
Order: Caulobacterales (90%)
10 8110 bp 68.05 12.91 90.96
cn_combo_scaffold_4669 PHE14_52
Order: Caulobacterales (85.71%)
14 15158 bp 69.75 12.93 92.24
cn_combo_scaffold_7350 PHE14_114
Order: Caulobacterales (88.89%)
9 8348 bp 67.73 12.94 92.11
cn_combo_scaffold_6488 PHE14_99
Order: Caulobacterales (81.25%)
16 16429 bp 69.04 12.98 90.04
cn_combo_scaffold_12053 PHE14_241
Order: Caulobacterales (50%)
6 5291 bp 69.40 12.98 91.12
cn_combo_scaffold_9114 PHE14_148
Species: R_Phenylobacterium_69_31 (57.14%)
7 6901 bp 68.95 13.04 92.33
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.