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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_12284 PHE14_242
Species: Candidatus Phaeomarinobacter ectocarpi (50%)
4 5203 bp 70.88 10.32 99.98
cn_combo_scaffold_7680 PHE14_122
Species: Caulobacter sp. K31 (80%)
5 8030 bp 62.08 10.93 99.53
cn_combo_scaffold_12052 PHE14_211
Order: Caulobacterales (100%)
5 5291 bp 72.75 14.33 99.34
cn_combo_scaffold_5811 PHE14_232
Genus: Sphingobium (57.14%)
7 10299 bp 68.83 10.27 99.33
cn_combo_scaffold_10671 PHE14_239
Class: Alphaproteobacteria (57.14%)
7 5937 bp 71.47 13.69 98.48
cn_combo_scaffold_4870 PHE14_58
Order: Caulobacterales (83.33%)
12 12089 bp 69.85 13.56 98.30
cn_combo_scaffold_11000 PHE14_187
Order: Caulobacterales (60%)
5 5766 bp 71.33 14.07 98.23
cn_combo_scaffold_9625 PHE14_155
Species: Brevundimonas diminuta (80%)
5 6535 bp 68.45 8.84 97.69
cn_combo_scaffold_7614 PHE14_121
Species: R_Phenylobacterium_70_10 (55.56%)
9 8105 bp 66.47 15.10 97.61
cn_combo_scaffold_8064 PHE14_130
Order: Caulobacterales (100%)
9 7712 bp 71.89 14.25 97.52
cn_combo_scaffold_11008 PHE14_188
Species: R_Phenylobacterium_70_10 (50%)
6 5762 bp 73.12 15.05 97.41
cn_combo_scaffold_17196 PHE14_225
Species: R_Phenylobacterium_70_10 (57.14%)
7 5999 bp 69.86 13.79 97.12
cn_combo_scaffold_11001 PHE14_244
Class: Alphaproteobacteria (60%)
5 5765 bp 71.10 12.40 97.10
cn_combo_scaffold_12565 PHE14_218
Species: Caulobacter sp. AP07 (66.67%)
6 5098 bp 71.64 14.59 96.98
cn_combo_scaffold_6357 PHE14_94
Species: R_Phenylobacterium_70_10 (55.56%)
9 9510 bp 70.43 13.79 96.72
cn_combo_scaffold_10448 PHE14_175
Order: Caulobacterales (66.67%)
6 6061 bp 69.96 13.31 96.47
cn_combo_scaffold_12426 PHE14_216
Species: Sphingopyxis sp. LC81 (100%)
1 5153 bp 64.02 14.26 96.47
cn_combo_scaffold_8169 PHE14_133
Order: Caulobacterales (90.91%)
11 9922 bp 69.95 14.71 96.24
cn_combo_scaffold_8479 PHE14_134
Species: Phenylobacterium zucineum (62.5%)
8 7367 bp 72.00 13.74 96.10
cn_combo_scaffold_7835 PHE14_125
Order: Caulobacterales (90%)
10 7904 bp 68.72 15.11 96.10
cn_combo_scaffold_6451 PHE14_98
Order: Caulobacterales (81.82%)
11 9372 bp 70.70 13.55 96.03
cn_combo_scaffold_5715 PHE14_70
Species: Phenylobacterium zucineum (50%)
14 10445 bp 69.63 14.66 96.02
cn_combo_scaffold_4186 PHE14_38
Order: Caulobacterales (100%)
14 13976 bp 70.47 14.40 95.86
cn_combo_scaffold_11655 PHE14_200
Species: Brevundimonas diminuta (100%)
5 5461 bp 67.26 9.91 95.86
cn_combo_scaffold_5528 PHE14_64
Order: Caulobacterales (90%)
10 10784 bp 71.81 13.26 95.84
cn_combo_scaffold_3156 PHE14_24
Order: Caulobacterales (80%)
20 18085 bp 69.91 14.10 95.79
cn_combo_scaffold_6312 PHE14_91
Order: Caulobacterales (75%)
8 9567 bp 72.39 14.61 95.77
cn_combo_scaffold_5337 PHE14_62
Species: R_Phenylobacterium_69_31 (55.56%)
9 11082 bp 69.77 14.26 95.70
cn_combo_scaffold_7260 PHE14_112
Order: Caulobacterales (88.89%)
9 8437 bp 72.75 13.69 95.69
cn_combo_scaffold_6147 PHE14_86
Order: Caulobacterales (61.54%)
13 9803 bp 70.13 14.90 95.66
cn_combo_scaffold_10033 PHE14_166
Order: Caulobacterales (80%)
5 6296 bp 70.98 14.72 95.63
cn_combo_scaffold_10587 PHE14_182
Order: Caulobacterales (100%)
8 10271 bp 68.82 15.60 95.57
cn_combo_scaffold_10030 PHE14_165
Order: Caulobacterales (100%)
5 6298 bp 71.51 13.54 95.51
cn_combo_scaffold_12148 PHE14_246
Order: Caulobacterales (57.14%)
7 5252 bp 70.13 14.62 95.51
cn_combo_scaffold_3250 PHE14_25
Order: Caulobacterales (80%)
15 17605 bp 69.36 15.14 95.48
cn_combo_scaffold_11825 PHE14_204
Species: Phenylobacterium zucineum (60%)
5 5389 bp 68.88 13.92 95.47
cn_combo_scaffold_9819 PHE14_162
Order: Caulobacterales (100%)
16 12294 bp 69.61 13.85 95.39
cn_combo_scaffold_10555 PHE14_181
Order: Caulobacterales (57.14%)
7 6001 bp 69.67 13.73 95.28
cn_combo_scaffold_4629 PHE14_50
Class: Alphaproteobacteria (76.92%)
13 12711 bp 70.76 14.71 95.28
cn_combo_scaffold_3519 PHE14_29
Species: Phenylobacterium zucineum (58.62%)
29 29261 bp 68.01 13.86 95.25
cn_combo_scaffold_7147 PHE14_234
Class: Alphaproteobacteria (87.5%)
8 8554 bp 68.96 13.97 95.22
cn_combo_scaffold_8905 PHE14_141
Order: Caulobacterales (90%)
10 7061 bp 68.67 12.90 95.13
cn_combo_scaffold_11629 PHE14_199
Species: R_Phenylobacterium_69_31 (50%)
6 5475 bp 70.41 12.29 95.07
cn_combo_scaffold_2284 PHE14_10
Order: Caulobacterales (83.33%)
18 23880 bp 68.45 13.52 95.04
cn_combo_scaffold_1831 PHE14_5
Order: Caulobacterales (78.13%)
32 29521 bp 69.85 13.86 95.00
cn_combo_scaffold_2328 PHE14_12
Order: Caulobacterales (77.27%)
22 25243 bp 71.10 14.89 94.98
cn_combo_scaffold_10662 PHE14_183
Order: Caulobacterales (60%)
5 5945 bp 71.46 13.56 94.87
cn_combo_scaffold_10940 PHE14_186
Species: R_Phenylobacterium_70_10 (50%)
6 5797 bp 67.24 14.54 94.65
cn_combo_scaffold_2304 PHE14_11
Order: Caulobacterales (95.83%)
24 23711 bp 69.70 15.31 94.60
cn_combo_scaffold_5628 PHE14_67
Order: Caulobacterales (88.89%)
9 10590 bp 69.89 14.63 94.59
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.