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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 1-50 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_6142 PHE14_87
Order: Caulobacterales (61.11%)
18 14442 bp 63.58 10.25 67.66
cn_combo_scaffold_13506 PHE14_221
Class: Alphaproteobacteria (100%)
5 6959 bp 68.53 13.36 77.77
cn_combo_scaffold_10894 PHE14_185
Order: Caulobacterales (80%)
5 5818 bp 66.40 14.83 80.85
cn_combo_scaffold_5900 PHE14_77
Order: Caulobacterales (62.5%)
16 10148 bp 68.66 13.59 81.59
cn_combo_scaffold_4637 PHE14_51
Order: Caulobacterales (90.91%)
11 13319 bp 67.35 12.68 81.65
cn_combo_scaffold_13147 PHE14_220
Genus: Caulobacter (54.55%)
11 7476 bp 71.20 13.23 81.94
cn_combo_scaffold_18632 PHE14_227
Species: Brevundimonas diminuta (66.67%)
9 5328 bp 66.08 8.15 82.41
cn_combo_scaffold_7545 PHE14_229
Phylum: Proteobacteria (57.14%)
7 8163 bp 68.49 10.56 83.09
cn_combo_scaffold_9324 PHE14_149
Species: Phenylobacterium zucineum (50%)
6 6729 bp 68.17 15.78 83.24
cn_combo_scaffold_7438 PHE14_117
Species: Sphingopyxis sp. MC1 (50%)
6 8270 bp 60.18 19.23 83.33
cn_combo_scaffold_8969 PHE14_145
Order: Sphingomonadales (50%)
6 7017 bp 63.47 8.41 83.45
cn_combo_scaffold_9747 PHE14_159
Species: Phenylobacterium zucineum (50%)
6 6471 bp 62.28 11.53 83.59
cn_combo_scaffold_8742 PHE14_137
Order: Caulobacterales (100%)
10 11944 bp 69.65 14.02 83.82
cn_combo_scaffold_11582 PHE14_197
Species: R_Phenylobacterium_69_31 (50%)
6 5496 bp 62.34 11.06 83.84
cn_combo_scaffold_8038 PHE14_129
Order: Caulobacterales (100%)
8 7738 bp 68.13 15.86 84.05
cn_combo_scaffold_6889 PHE14_105
Order: Caulobacterales (81.25%)
16 15761 bp 70.23 15.23 84.28
cn_combo_scaffold_10314 PHE14_171
Order: Caulobacterales (50%)
8 6141 bp 67.50 13.66 84.35
cn_combo_scaffold_8646 PHE14_238
Class: Alphaproteobacteria (53.85%)
13 7251 bp 69.59 14.12 84.57
cn_combo_scaffold_11720 PHE14_202
Species: R_Phenylobacterium_70_10 (66.67%)
6 5433 bp 71.16 16.58 84.65
cn_combo_scaffold_5948 PHE14_79
Order: Caulobacterales (69.23%)
13 10074 bp 67.03 14.06 84.67
cn_combo_scaffold_6686 PHE14_102
Order: Caulobacterales (83.33%)
12 9104 bp 70.44 15.34 85.08
cn_combo_scaffold_15877 PHE14_223
Order: Caulobacterales (60%)
10 6231 bp 71.14 14.56 85.12
cn_combo_scaffold_10355 PHE14_172
Order: Caulobacterales (100%)
6 6112 bp 71.48 14.45 85.16
cn_combo_scaffold_11575 PHE14_198
Class: Alphaproteobacteria (77.78%)
9 6201 bp 69.39 12.58 85.55
cn_combo_scaffold_9656 PHE14_156
Order: Caulobacterales (57.14%)
7 6521 bp 67.90 12.76 85.68
cn_combo_scaffold_16534 PHE14_224
Order: Caulobacterales (100%)
6 7390 bp 70.34 13.73 85.86
cn_combo_scaffold_9774 PHE14_160
Order: Caulobacterales (71.43%)
7 6455 bp 67.59 13.34 86.12
cn_combo_scaffold_8944 PHE14_144
Class: Alphaproteobacteria (100%)
9 7037 bp 67.57 10.84 86.29
cn_combo_scaffold_11682 PHE14_201
Order: Caulobacterales (87.5%)
8 8166 bp 70.81 14.95 86.33
cn_combo_scaffold_8218 PHE14_236
Class: Alphaproteobacteria (70%)
10 7583 bp 66.79 11.78 86.36
cn_combo_scaffold_5307 PHE14_60
Order: Caulobacterales (78.57%)
14 11142 bp 67.43 16.22 86.73
cn_combo_scaffold_11789 PHE14_203
Species: R_Phenylobacterium_70_10 (50%)
8 5406 bp 66.26 15.50 86.90
cn_combo_scaffold_7773 PHE14_124
Class: Alphaproteobacteria (66.67%)
6 7959 bp 64.44 10.53 87.26
cn_combo_scaffold_6213 PHE14_88
Order: Caulobacterales (70%)
10 9700 bp 67.91 15.59 87.59
cn_combo_scaffold_6229 PHE14_89
Order: Caulobacterales (85.71%)
7 9676 bp 69.74 14.57 87.77
cn_combo_scaffold_7705 PHE14_123
Order: Caulobacterales (77.78%)
9 8010 bp 66.90 13.73 87.82
cn_combo_scaffold_5506 PHE14_63
Order: Caulobacterales (78.57%)
14 10803 bp 67.23 12.61 87.92
cn_combo_scaffold_11529 PHE14_196
Order: Caulobacterales (50%)
6 5517 bp 69.53 12.80 87.98
cn_combo_scaffold_5815 PHE14_74
Order: Caulobacterales (60%)
20 20395 bp 69.33 14.72 88.08
cn_combo_scaffold_11352 PHE14_194
Species: Caulobacter sp. K31 (66.67%)
9 7258 bp 68.08 11.52 88.12
cn_combo_scaffold_5977 PHE14_83
Order: Caulobacterales (90.91%)
11 10023 bp 68.61 13.04 88.15
cn_combo_scaffold_6978 PHE14_106
Order: Caulobacterales (90.91%)
11 8758 bp 69.92 14.71 88.24
cn_combo_scaffold_10363 PHE14_173
Order: Caulobacterales (88.89%)
9 6108 bp 68.61 15.42 88.26
cn_combo_scaffold_4244 PHE14_40
Order: Caulobacterales (100%)
17 13795 bp 70.15 15.06 88.31
cn_combo_scaffold_4183 PHE14_36
Species: R_Phenylobacterium_70_10 (50%)
16 13984 bp 70.22 14.25 88.34
cn_combo_scaffold_4806 PHE14_54
Order: Caulobacterales (76.47%)
17 17690 bp 68.52 14.07 88.38
cn_combo_scaffold_1425 PHE14_2
Order: Caulobacterales (76.47%)
34 36230 bp 69.17 13.94 88.47
cn_combo_scaffold_4576 PHE14_46
Order: Caulobacterales (52.63%)
19 12863 bp 67.08 12.67 88.49
cn_combo_scaffold_6381 PHE14_95
Order: Caulobacterales (80%)
15 9475 bp 69.42 14.60 88.56
cn_combo_scaffold_8122 PHE14_132
Order: Caulobacterales (61.54%)
13 7657 bp 67.77 13.74 88.59
Displaying items 1-50 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.