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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 51-100 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_10363 PHE14_173
Order: Caulobacterales (88.89%)
9 6108 bp 68.61 15.42 88.26
cn_combo_scaffold_10355 PHE14_172
Order: Caulobacterales (100%)
6 6112 bp 71.48 14.45 85.16
cn_combo_scaffold_10314 PHE14_171
Order: Caulobacterales (50%)
8 6141 bp 67.50 13.66 84.35
cn_combo_scaffold_10243 PHE14_170
Species: R_Phenylobacterium_70_10 (66.67%)
6 6187 bp 70.50 14.97 92.27
cn_combo_scaffold_11575 PHE14_198
Class: Alphaproteobacteria (77.78%)
9 6201 bp 69.39 12.58 85.55
cn_combo_scaffold_15877 PHE14_223
Order: Caulobacterales (60%)
10 6231 bp 71.14 14.56 85.12
cn_combo_scaffold_10128 PHE14_169
Species: R_Phenylobacterium_70_10 (50%)
4 6249 bp 68.52 10.37 93.86
cn_combo_scaffold_10103 PHE14_168
Order: Caulobacterales (50%)
8 6267 bp 70.02 11.97 92.63
cn_combo_scaffold_10065 PHE14_167
Order: Caulobacterales (60%)
5 6287 bp 71.40 15.84 93.34
cn_combo_scaffold_10033 PHE14_166
Order: Caulobacterales (80%)
5 6296 bp 70.98 14.72 95.63
cn_combo_scaffold_10030 PHE14_165
Order: Caulobacterales (100%)
5 6298 bp 71.51 13.54 95.51
cn_combo_scaffold_9939 PHE14_164
Genus: Caulobacter (100%)
5 6353 bp 68.82 12.21 92.22
cn_combo_scaffold_9895 PHE14_163
Species: Phenylobacterium zucineum (50%)
4 6382 bp 69.60 13.99 92.32
cn_combo_scaffold_14060 PHE14_222
Species: R_Phenylobacterium_70_10 (50%)
8 6383 bp 71.63 13.69 93.53
cn_combo_scaffold_9789 PHE14_161
Species: Phenylobacterium zucineum (50%)
10 6444 bp 68.65 14.53 90.74
cn_combo_scaffold_9774 PHE14_160
Order: Caulobacterales (71.43%)
7 6455 bp 67.59 13.34 86.12
cn_combo_scaffold_9747 PHE14_159
Species: Phenylobacterium zucineum (50%)
6 6471 bp 62.28 11.53 83.59
cn_combo_scaffold_9729 PHE14_158
Order: Caulobacterales (60%)
5 6482 bp 70.84 14.02 89.79
cn_combo_scaffold_9673 PHE14_157
Order: Caulobacterales (100%)
6 6511 bp 71.77 14.88 94.46
cn_combo_scaffold_9656 PHE14_156
Order: Caulobacterales (57.14%)
7 6521 bp 67.90 12.76 85.68
cn_combo_scaffold_9625 PHE14_155
Species: Brevundimonas diminuta (80%)
5 6535 bp 68.45 8.84 97.69
cn_combo_scaffold_9576 PHE14_153
Species: R_Phenylobacterium_70_10 (50%)
8 6572 bp 69.80 13.94 90.43
cn_combo_scaffold_9400 PHE14_151
Species: R_Phenylobacterium_69_31 (66.67%)
6 6681 bp 65.11 9.04 89.72
cn_combo_scaffold_9329 PHE14_150
Order: Caulobacterales (100%)
8 6728 bp 69.72 13.35 90.78
cn_combo_scaffold_9324 PHE14_149
Species: Phenylobacterium zucineum (50%)
6 6729 bp 68.17 15.78 83.24
cn_combo_scaffold_9114 PHE14_148
Species: R_Phenylobacterium_69_31 (57.14%)
7 6901 bp 68.95 13.04 92.33
cn_combo_scaffold_9100 PHE14_147
Order: Caulobacterales (80%)
5 6915 bp 68.84 13.30 90.59
cn_combo_scaffold_13506 PHE14_221
Class: Alphaproteobacteria (100%)
5 6959 bp 68.53 13.36 77.77
cn_combo_scaffold_9012 PHE14_146
Order: Xanthomonadales (80%)
5 6980 bp 68.84 13.95 92.28
cn_combo_scaffold_10469 PHE14_176
Order: Caulobacterales (70%)
10 6998 bp 67.79 11.43 92.13
cn_combo_scaffold_8969 PHE14_145
Order: Sphingomonadales (50%)
6 7017 bp 63.47 8.41 83.45
cn_combo_scaffold_8944 PHE14_144
Class: Alphaproteobacteria (100%)
9 7037 bp 67.57 10.84 86.29
cn_combo_scaffold_8913 PHE14_142
Species: R_Phenylobacterium_70_10 (50%)
8 7056 bp 69.05 12.29 90.01
cn_combo_scaffold_8905 PHE14_141
Order: Caulobacterales (90%)
10 7061 bp 68.67 12.90 95.13
cn_combo_scaffold_8873 PHE14_140
Species: Phenylobacterium zucineum (66.67%)
6 7082 bp 70.46 15.02 93.19
cn_combo_scaffold_9550 PHE14_152
Order: Caulobacterales (71.43%)
7 7099 bp 69.46 14.30 93.18
cn_combo_scaffold_8801 PHE14_138
Order: Caulobacterales (55.56%)
9 7146 bp 70.68 13.39 92.53
cn_combo_scaffold_8739 PHE14_136
Species: R_Phenylobacterium_70_10 (50%)
8 7184 bp 70.16 13.22 94.46
cn_combo_scaffold_8723 PHE14_135
Order: Caulobacterales (71.43%)
7 7193 bp 70.62 13.43 93.47
cn_combo_scaffold_8646 PHE14_238
Class: Alphaproteobacteria (53.85%)
13 7251 bp 69.59 14.12 84.57
cn_combo_scaffold_11352 PHE14_194
Species: Caulobacter sp. K31 (66.67%)
9 7258 bp 68.08 11.52 88.12
cn_combo_scaffold_11153 PHE14_192
Order: Caulobacterales (88.89%)
9 7352 bp 68.02 16.17 91.40
cn_combo_scaffold_8479 PHE14_134
Species: Phenylobacterium zucineum (62.5%)
8 7367 bp 72.00 13.74 96.10
cn_combo_scaffold_8451 PHE14_237
Class: Alphaproteobacteria (57.14%)
7 7387 bp 68.50 13.54 93.16
cn_combo_scaffold_16534 PHE14_224
Order: Caulobacterales (100%)
6 7390 bp 70.34 13.73 85.86
cn_combo_scaffold_13147 PHE14_220
Genus: Caulobacter (54.55%)
11 7476 bp 71.20 13.23 81.94
cn_combo_scaffold_8218 PHE14_236
Class: Alphaproteobacteria (70%)
10 7583 bp 66.79 11.78 86.36
cn_combo_scaffold_8122 PHE14_132
Order: Caulobacterales (61.54%)
13 7657 bp 67.77 13.74 88.59
cn_combo_scaffold_8119 PHE14_131
Order: Caulobacterales (66.67%)
9 7660 bp 69.71 14.07 91.92
cn_combo_scaffold_8064 PHE14_130
Order: Caulobacterales (100%)
9 7712 bp 71.89 14.25 97.52
Displaying items 51-100 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.