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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 101-150 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_9012 PHE14_146
Order: Xanthomonadales (80%)
5 6980 bp 68.84 13.95 92.28
cn_combo_scaffold_10243 PHE14_170
Species: R_Phenylobacterium_70_10 (66.67%)
6 6187 bp 70.50 14.97 92.27
cn_combo_scaffold_4669 PHE14_52
Order: Caulobacterales (85.71%)
14 15158 bp 69.75 12.93 92.24
cn_combo_scaffold_9939 PHE14_164
Genus: Caulobacter (100%)
5 6353 bp 68.82 12.21 92.22
cn_combo_scaffold_7310 PHE14_113
Order: Caulobacterales (100%)
9 8388 bp 68.91 14.57 92.20
cn_combo_scaffold_4670 PHE14_53
Order: Caulobacterales (80%)
20 19838 bp 69.65 14.80 92.19
cn_combo_scaffold_7475 PHE14_118
Species: Phenylobacterium zucineum (54.55%)
11 8240 bp 69.93 14.22 92.18
cn_combo_scaffold_3874 PHE14_34
Order: Caulobacterales (85%)
20 17335 bp 70.15 14.32 92.17
cn_combo_scaffold_2727 PHE14_20
Genus: Caulobacter (50%)
20 20527 bp 68.97 13.90 92.13
cn_combo_scaffold_10469 PHE14_176
Order: Caulobacterales (70%)
10 6998 bp 67.79 11.43 92.13
cn_combo_scaffold_3734 PHE14_33
Order: Caulobacterales (94.12%)
17 15468 bp 68.48 13.37 92.13
cn_combo_scaffold_7350 PHE14_114
Order: Caulobacterales (88.89%)
9 8348 bp 67.73 12.94 92.11
cn_combo_scaffold_2136 PHE14_8
Order: Caulobacterales (86.67%)
30 28047 bp 70.36 14.39 92.08
cn_combo_scaffold_24413 PHE14_228
Order: Caulobacterales (100%)
7 5067 bp 70.46 15.22 92.07
cn_combo_scaffold_11060 PHE14_190
Order: Caulobacterales (77.78%)
9 5745 bp 68.41 13.32 92.06
cn_combo_scaffold_12774 PHE14_219
Order: Caulobacterales (60%)
5 5026 bp 68.44 14.03 91.98
cn_combo_scaffold_3110 PHE14_23
Order: Caulobacterales (100%)
19 18322 bp 70.29 14.17 91.97
cn_combo_scaffold_8119 PHE14_131
Order: Caulobacterales (66.67%)
9 7660 bp 69.71 14.07 91.92
cn_combo_scaffold_12014 PHE14_230
Order: Caulobacterales (55.56%)
9 5305 bp 70.03 12.74 91.89
cn_combo_scaffold_10710 PHE14_184
Species: Brevundimonas diminuta (50%)
10 5916 bp 63.76 10.63 91.89
cn_combo_scaffold_6328 PHE14_92
Order: Caulobacterales (81.82%)
11 9546 bp 70.23 14.98 91.86
cn_combo_scaffold_7592 PHE14_120
Order: Caulobacterales (75%)
12 11096 bp 69.78 14.64 91.71
cn_combo_scaffold_6654 PHE14_100
Order: Caulobacterales (80%)
10 9132 bp 69.57 16.95 91.62
cn_combo_scaffold_1755 PHE14_4
Order: Caulobacterales (70.97%)
31 30447 bp 70.28 14.83 91.53
cn_combo_scaffold_2515 PHE14_15
Order: Caulobacterales (88.89%)
18 22006 bp 69.04 14.10 91.52
cn_combo_scaffold_4336 PHE14_42
Order: Caulobacterales (76.92%)
13 13485 bp 70.73 14.45 91.50
cn_combo_scaffold_2724 PHE14_19
Class: Alphaproteobacteria (89.47%)
19 20568 bp 69.78 14.62 91.47
cn_combo_scaffold_4847 PHE14_57
Order: Caulobacterales (71.43%)
14 12143 bp 70.68 14.68 91.44
cn_combo_scaffold_4069 PHE14_35
Species: Phenylobacterium zucineum (53.33%)
15 14375 bp 69.79 13.93 91.41
cn_combo_scaffold_11153 PHE14_192
Order: Caulobacterales (88.89%)
9 7352 bp 68.02 16.17 91.40
cn_combo_scaffold_3151 PHE14_231
Class: Alphaproteobacteria (88.89%)
18 18107 bp 69.55 15.16 91.39
cn_combo_scaffold_5684 PHE14_69
Order: Caulobacterales (87.5%)
8 10498 bp 70.47 14.07 91.36
cn_combo_scaffold_11475 PHE14_245
Class: Alphaproteobacteria (77.78%)
9 5544 bp 69.39 13.58 91.34
cn_combo_scaffold_10402 PHE14_174
Species: R_Phenylobacterium_70_10 (50%)
6 6084 bp 69.51 14.23 91.32
cn_combo_scaffold_12352 PHE14_214
Species: Phenylobacterium zucineum (50%)
6 5175 bp 68.97 14.40 91.30
cn_combo_scaffold_4167 PHE14_37
Order: Caulobacterales (78.57%)
28 25115 bp 69.56 14.92 91.25
cn_combo_scaffold_3546 PHE14_30
Order: Caulobacterales (57.89%)
19 16209 bp 70.54 13.62 91.21
cn_combo_scaffold_2872 PHE14_22
Order: Caulobacterales (87.5%)
24 22027 bp 69.41 13.85 91.20
cn_combo_scaffold_6447 PHE14_97
Species: Caulobacter segnis (71.43%)
7 9382 bp 69.42 13.04 91.13
cn_combo_scaffold_12053 PHE14_241
Order: Caulobacterales (50%)
6 5291 bp 69.40 12.98 91.12
cn_combo_scaffold_7234 PHE14_111
Order: Caulobacterales (83.33%)
6 8469 bp 69.11 14.54 91.04
cn_combo_scaffold_5787 PHE14_71
Order: Caulobacterales (86.67%)
15 10872 bp 71.02 14.66 91.00
cn_combo_scaffold_4592 PHE14_48
Order: Caulobacterales (100%)
18 13938 bp 69.90 14.45 90.98
cn_combo_scaffold_7610 PHE14_119
Order: Caulobacterales (90%)
10 8110 bp 68.05 12.91 90.96
cn_combo_scaffold_3390 PHE14_27
Species: R_Phenylobacterium_70_10 (53.13%)
32 26109 bp 69.71 13.96 90.90
cn_combo_scaffold_3423 PHE14_28
Order: Caulobacterales (89.47%)
19 16824 bp 69.38 14.60 90.80
cn_combo_scaffold_9329 PHE14_150
Order: Caulobacterales (100%)
8 6728 bp 69.72 13.35 90.78
cn_combo_scaffold_12012 PHE14_210
Species: R_Phenylobacterium_69_31 (50%)
10 8155 bp 67.53 13.34 90.75
cn_combo_scaffold_9789 PHE14_161
Species: Phenylobacterium zucineum (50%)
10 6444 bp 68.65 14.53 90.74
cn_combo_scaffold_2013 PHE14_6
Species: Phenylobacterium zucineum (50%)
28 27148 bp 69.91 14.82 90.71
Displaying items 101-150 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.