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CN-SCN_Thiobacillus_1177x

CN-SCN_Hydrogenophilales_63_1145
In projects: CN-SCN

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 1145.41 Longest contig: 44.94 Kbp Bin length: 1.81 Mbp GC content: 63.32 %
Contigs count: 190 Features count: 2040 rRNAs count: 0 tRNAs count: 11

Genome completeness

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38

Description

Partial multiple 15

Displaying items 51-100 of 190 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_25395 THIO1207_167
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 5053 bp 66.85 1349.83 92.72
cn_combo_scaffold_14350 THIO1207_108
Species: RBG_16_Gallionellales_57_15_curated (50%)
4 6300 bp 57.46 1345.38 84.48
cn_combo_scaffold_21167 THIO1207_143
Species: Thiobacillus denitrificans (57.14%)
7 6137 bp 66.56 1334.61 94.69
cn_combo_scaffold_9883 THIO1207_70
Species: GWE1_Thiobacillus_62_9_curated (50%)
10 8098 bp 56.58 1334.12 87.61
cn_combo_scaffold_26384 THIO1207_168
Order: Hydrogenophilales (50%)
6 5063 bp 66.07 1331.05 91.01
cn_combo_scaffold_11144 THIO1207_85
Class: Betaproteobacteria (60%)
10 8434 bp 64.60 1329.50 85.52
cn_combo_scaffold_33248 THIO1207_181
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
10 6753 bp 63.47 1327.37 89.12
cn_combo_scaffold_35046 THIO1207_185
Species: GWE1_Thiobacillus_62_9_curated (53.85%)
13 9491 bp 66.28 1321.58 86.45
cn_combo_scaffold_19801 THIO1207_134
Order: Burkholderiales (50%)
8 6799 bp 63.23 1320.21 89.66
cn_combo_scaffold_20213 THIO1207_139
Phylum: Proteobacteria (77.78%)
9 9238 bp 61.40 1313.20 90.28
cn_combo_scaffold_22346 THIO1207_150
Order: Hydrogenophilales (100%)
9 7003 bp 69.41 1284.76 92.53
cn_combo_scaffold_5461 THIO1207_34
Order: Hydrogenophilales (70%)
10 10881 bp 62.34 1278.34 94.57
cn_combo_scaffold_24636 THIO1207_163
Order: Hydrogenophilales (80%)
5 5926 bp 68.02 1266.33 92.69
cn_combo_scaffold_31063 THIO1207_177
Species: Thiobacillus denitrificans (62.5%)
8 7781 bp 66.53 1265.90 93.46
cn_combo_scaffold_3646 THIO1207_18 23 16726 bp 62.50 1251.83 84.86
cn_combo_scaffold_20181 THIO1207_138
Order: Hydrogenophilales (100%)
8 7703 bp 67.03 1250.20 87.43
cn_combo_scaffold_20086 THIO1207_137
Class: Betaproteobacteria (61.54%)
13 8923 bp 63.99 1247.48 76.82
cn_combo_scaffold_12717 THIO1207_100
Class: Betaproteobacteria (50%)
8 5676 bp 58.79 1241.07 94.13
cn_combo_scaffold_14581 THIO1207_111
Order: Hydrogenophilales (66.67%)
9 7608 bp 62.80 1240.21 80.56
cn_combo_scaffold_8221 THIO1207_54
Phylum: Proteobacteria (56.25%)
16 8968 bp 59.68 1237.71 91.66
cn_combo_scaffold_27784 THIO1207_172
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 5678 bp 69.23 1233.83 85.75
cn_combo_scaffold_23353 THIO1207_157
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (62.5%)
8 5506 bp 64.55 1224.65 92.46
cn_combo_scaffold_24546 THIO1207_162
Phylum: Proteobacteria (88.89%)
9 7807 bp 70.03 1220.26 95.72
cn_combo_scaffold_19773 THIO1207_133
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (62.5%)
8 5498 bp 65.31 1214.13 88.94
cn_combo_scaffold_8803 THIO1207_58
Class: Betaproteobacteria (83.33%)
6 7146 bp 63.13 1209.36 80.23
cn_combo_scaffold_36675 THIO1207_189
Species: GWE1_Thiobacillus_62_9_curated (62.5%)
8 5105 bp 66.13 1202.72 90.79
cn_combo_scaffold_35066 THIO1207_183
Order: Hydrogenophilales (60%)
5 5588 bp 66.05 1201.41 89.87
cn_combo_scaffold_9101 THIO1207_62
Class: Betaproteobacteria (54.55%)
11 11346 bp 61.95 1196.25 89.05
cn_combo_scaffold_4185 THIO1207_20
Class: Betaproteobacteria (63.64%)
11 18179 bp 60.93 1195.70 93.83
cn_combo_scaffold_8167 THIO1207_53
Class: Betaproteobacteria (50%)
6 7623 bp 63.52 1188.85 87.64
cn_combo_scaffold_15272 THIO1207_117
Species: Thiobacillus denitrificans (100%)
2 5054 bp 70.83 1182.13 99.49
cn_combo_scaffold_35196 THIO1207_186
Order: Hydrogenophilales (85.71%)
7 5407 bp 67.62 1179.73 92.10
cn_combo_scaffold_15873 THIO1207_120
Class: Betaproteobacteria (91.67%)
24 15139 bp 68.90 1172.42 94.44
cn_combo_scaffold_28381 THIO1207_175
Order: Hydrogenophilales (63.64%)
11 7784 bp 66.12 1163.51 90.96
cn_combo_scaffold_12071 THIO1207_90
Genus: Pseudomonas (83.33%)
6 5284 bp 61.30 1163.34 91.01
cn_combo_scaffold_11656 THIO1207_89
Class: Betaproteobacteria (90%)
10 10936 bp 64.30 1162.25 94.26
cn_combo_scaffold_7486 THIO1207_49
Class: Betaproteobacteria (100%)
9 8227 bp 65.44 1162.00 94.99
cn_combo_scaffold_28328 THIO1207_173
Phylum: Proteobacteria (66.67%)
9 6943 bp 60.81 1161.75 82.01
cn_combo_scaffold_9969 THIO1207_71
Class: Alphaproteobacteria (50%)
8 6334 bp 60.10 1161.57 92.97
cn_combo_scaffold_14564 THIO1207_110
Species: GWE1_Thiobacillus_62_9_curated (63.64%)
11 11894 bp 61.53 1160.09 84.82
cn_combo_scaffold_15956 THIO1207_121
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
9 7225 bp 63.65 1154.02 84.58
cn_combo_scaffold_6053 THIO1207_37
Species: GWE1_Thiobacillus_62_9_curated (64.29%)
14 9924 bp 66.84 1149.28 96.89
cn_combo_scaffold_27145 THIO1207_170
Order: Hydrogenophilales (77.78%)
9 7603 bp 67.33 1148.81 89.85
cn_combo_scaffold_10727 THIO1207_81
Phylum: Proteobacteria (75%)
8 5911 bp 56.79 1145.95 88.31
cn_combo_scaffold_17056 THIO1207_126
Species: Thioalkalivibrio sulfidiphilus (50%)
8 8931 bp 59.09 1131.05 85.86
cn_combo_scaffold_48891 THIO1207_195
Order: Hydrogenophilales (100%)
7 5035 bp 68.18 1128.74 71.50
cn_combo_scaffold_17533 THIO1207_130
Phylum: Proteobacteria (80%)
10 9882 bp 69.38 1128.03 85.40
cn_combo_scaffold_8604 THIO1207_56
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (77.78%)
9 7277 bp 64.75 1127.10 97.33
cn_combo_scaffold_4706 THIO1207_23
Class: Betaproteobacteria (72.22%)
18 14848 bp 58.40 1124.80 94.52
cn_combo_scaffold_10106 THIO1207_73
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (87.5%)
8 6264 bp 63.83 1122.40 95.69
Displaying items 51-100 of 190 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.