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RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_33_21

RIFCSPHIGHO2_02_FULL_unknown_33_21

Consensus taxonomy:

Taxonomy override: Woesearchaeota

Displaying items 1-50 of 72 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifcsphigho2_02_scaffold_36824 4 5665 bp 34.39 20.18 77.02
rifcsphigho2_02_scaffold_34367 7 5920 bp 34.21 21.46 79.31
rifcsphigho2_02_scaffold_31293
Domain: Archaea (66.67%)
6 6272 bp 33.77 20.23 79.02
rifcsphigho2_02_scaffold_50357 7 6391 bp 32.81 21.69 76.42
rifcsphigho2_02_scaffold_143857 5 6769 bp 31.82 19.94 100.12
rifcsphigho2_02_scaffold_26657
Domain: Bacteria (55.56%)
9 6932 bp 35.23 23.35 80.93
rifcsphigho2_02_scaffold_31176 7 7145 bp 33.86 20.83 79.99
rifcsphigho2_02_scaffold_23832
Domain: Archaea (57.14%)
7 7435 bp 33.32 21.65 75.90
rifcsphigho2_02_scaffold_22128
Domain: Archaea (57.14%)
7 7780 bp 32.62 22.10 79.34
rifcsphigho2_02_scaffold_26820 7 7802 bp 33.80 22.15 81.56
rifcsphigho2_02_scaffold_21282
Domain: Archaea (66.67%)
6 7975 bp 32.21 24.70 75.20
rifcsphigho2_02_scaffold_20995 9 8039 bp 33.45 21.36 83.63
rifcsphigho2_02_scaffold_19120 7 8527 bp 33.61 19.93 87.64
rifcsphigho2_02_scaffold_18601 13 8664 bp 33.06 19.91 85.87
rifcsphigho2_02_scaffold_22181
Domain: Archaea (50%)
10 8750 bp 34.43 21.45 75.22
rifcsphigho2_02_scaffold_18408 11 9057 bp 33.25 20.60 83.90
rifcsphigho2_02_scaffold_16394
Domain: Archaea (77.78%)
9 9375 bp 35.20 22.05 77.76
rifcsphigho2_02_scaffold_26082 5 9564 bp 35.11 18.52 80.77
rifcsphigho2_02_scaffold_13949
Domain: Archaea (55.56%)
9 10322 bp 33.47 20.16 87.28
rifcsphigho2_02_scaffold_35468 12 11396 bp 32.22 22.39 91.03
rifcsphigho2_02_scaffold_28480 15 11585 bp 32.08 21.42 80.92
rifcsphigho2_02_scaffold_10280 15 12402 bp 33.10 22.00 84.67
rifcsphigho2_02_scaffold_10247 12 12420 bp 32.71 21.40 87.27
rifcsphigho2_02_scaffold_8481
Domain: Archaea (66.67%)
12 13832 bp 33.22 22.10 77.43
rifcsphigho2_02_scaffold_8129
Domain: Archaea (61.54%)
13 14174 bp 33.37 20.74 75.16
rifcsphigho2_02_scaffold_11062
Domain: Archaea (50%)
14 14237 bp 34.78 22.10 68.02
rifcsphigho2_02_scaffold_7922 14 14407 bp 34.03 21.06 85.90
rifcsphigho2_02_scaffold_7663 17 14675 bp 33.33 21.64 82.48
rifcsphigho2_02_scaffold_7222
Domain: Archaea (65%)
20 15201 bp 32.07 20.76 80.18
rifcsphigho2_02_scaffold_7038 14 16350 bp 31.18 22.28 82.92
rifcsphigho2_02_scaffold_5682 8 17350 bp 33.49 21.20 91.68
rifcsphigho2_02_scaffold_9881 19 18167 bp 34.06 22.33 82.58
rifcsphigho2_02_scaffold_5221 21 18206 bp 31.39 21.65 80.08
rifcsphigho2_02_scaffold_8844 20 18532 bp 32.79 20.56 76.85
rifcsphigho2_02_scaffold_4737 16 19168 bp 32.39 22.21 87.69
rifcsphigho2_02_scaffold_5019
Domain: Archaea (50%)
14 19982 bp 34.53 22.05 82.44
rifcsphigho2_02_scaffold_5880
Domain: Archaea (55.56%)
18 20164 bp 32.51 21.83 77.50
rifcsphigho2_02_scaffold_4238
Domain: Archaea (83.33%)
18 20355 bp 34.55 20.78 77.17
rifcsphigho2_02_scaffold_10577
Domain: Archaea (52.17%)
23 20647 bp 33.60 21.40 79.48
rifcsphigho2_02_scaffold_9991 18 20774 bp 32.57 19.66 82.86
rifcsphigho2_02_scaffold_3430 19 22731 bp 33.40 21.20 85.80
rifcsphigho2_02_scaffold_4063 18 23200 bp 35.14 21.58 84.01
rifcsphigho2_02_scaffold_3177
Domain: Archaea (56.52%)
23 23696 bp 34.45 21.87 81.05
rifcsphigho2_02_scaffold_9320 29 27884 bp 33.49 20.73 81.35
rifcsphigho2_02_scaffold_2244
Domain: Archaea (58.33%)
24 28354 bp 32.99 21.48 86.98
rifcsphigho2_02_scaffold_3429 23 28714 bp 34.44 18.68 92.97
rifcsphigho2_02_scaffold_4476
Domain: Archaea (53.85%)
26 29293 bp 32.58 20.89 84.73
rifcsphigho2_02_scaffold_7506
Domain: Archaea (56.76%)
37 29639 bp 32.81 21.48 80.58
rifcsphigho2_02_scaffold_3401
Domain: Archaea (64.86%)
37 30703 bp 32.61 20.89 85.12
rifcsphigho2_02_scaffold_8125
Domain: Archaea (52.17%)
23 31435 bp 32.90 21.77 83.42
Displaying items 1-50 of 72 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.