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L1_007_000M1_scaffold_83

Search features with annotation key words

Displaying items 31-60 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_83_31
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26228..28720)
DNA (2493bp) protein (831aa)
Ferrous iron transporter FeoB n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSC3_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CCX83170.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ferrous iron transporter FeoB
L1_007_000M1_scaffold_83_32
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28809..29030)
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E5_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBL15540.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_33
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29116..29328)
DNA (213bp) protein (71aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E4_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBL15539.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_34
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29620..29991
DNA (372bp) protein (124aa)
Mn-dependent transcriptional regulator n=2 Tax=Ruminococcus RepID=D4L7E3_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL15538.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_35
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30171..30638)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15536.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_36
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30666..31265)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15535.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_37
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31361..33604)
DNA (2244bp) protein (748aa)
Transcriptional accessory protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSC9_9FIRM
Transcriptional accessory protein {ECO:0000313|EMBL:CCX83175.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transcriptional accessory protein
L1_007_000M1_scaffold_83_38
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33627..34520)
DNA (894bp) protein (298aa)
Formate/nitrite family of transporters n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7D8_9FIRM
Formate/nitrite family of transporters
Formate/nitrite family of transporters {ECO:0000313|EMBL:CBL15533.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_39
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34896..35729
DNA (834bp) protein (278aa)
Predicted membrane protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7D7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL15532.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_40
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35839..36330
DNA (492bp) protein (164aa)
Protein CotJB n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW86_9FIRM
Protein CotJB {ECO:0000313|EMBL:CCX83179.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_41
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36330..36428
DNA (99bp) protein (33aa)
Mn-containing catalase n=2 Tax=Ruminococcus RepID=D4L7D6_9FIRM
Mn-containing catalase
Mn-containing catalase {ECO:0000313|EMBL:CBL15531.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_42
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36447..37352)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E310_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX83182.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transcriptional regulator
L1_007_000M1_scaffold_83_43
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37513..38847
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSM3_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sodium:neurotransmitter symporter
L1_007_000M1_scaffold_83_44
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39069..39998)
DNA (930bp) protein (310aa)
Serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000313|EMBL:CBL15527.1}; EC=2.3.1.30 {ECO:0000313|EMBL:CBL15527.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Serine acetyltransferase n=2 Tax=Ruminococcus RepID=D4L7D2_9FIRM
L1_007_000M1_scaffold_83_45
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39991..40554)
DNA (564bp) protein (188aa)
Maf-like protein BN462_00948 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSM7_9FIRM
Maf-like protein BN462_00948 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
MAF protein
L1_007_000M1_scaffold_83_46
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40772..42055
DNA (1284bp) protein (428aa)
Putative GTPases (G3E family) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSE4_9FIRM
Putative GTPases (G3E family) {ECO:0000313|EMBL:CCX83190.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Putative GTPases (G3E family)
L1_007_000M1_scaffold_83_47
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42172..42561)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83195.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_48
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42733..43530)
DNA (798bp) protein (266aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4V1_9FIRM
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CCX83196.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_49
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43543..44193)
DNA (651bp) protein (217aa)
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSN6_9FIRM
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CCX83198.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L1_007_000M1_scaffold_83_50
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44336..45148)
DNA (813bp) protein (271aa)
ABC-type amino acid transport/signal transduction systems periplasmic component/domain n=2 Tax=root RepID=R5DSF5_9FIRM
ABC-type amino acid transport/signal transduction systems periplasmic component/domain {ECO:0000313|EMBL:CCX83200.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
L1_007_000M1_scaffold_83_51
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45338..46540
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83201.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
putative site-specific recombinase
L1_007_000M1_scaffold_83_52
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46611..47096
DNA (486bp) protein (162aa)
Mn-containing catalase n=2 Tax=Ruminococcus RepID=D4L7C5_9FIRM
Mn-containing catalase
Mn-containing catalase {ECO:0000313|EMBL:CBL15520.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_53
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47225..47764)
DNA (540bp) protein (180aa)
dTDP-4-amino-4 6-dideoxy-D-glucose transaminase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQ04_9FIRM
dTDP-4-amino-4 6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:CCX82273.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
L1_007_000M1_scaffold_83_54
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47737..48315)
DNA (579bp) protein (193aa)
Lipopolysaccharide biosynthesis protein RffA n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0C2_9FIRM
Lipopolysaccharide biosynthesis protein RffA {ECO:0000313|EMBL:CCX82272.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
L1_007_000M1_scaffold_83_55
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48341..49453)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E227_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82271.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_56
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49457..50623)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UAX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC79234.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
coenzyme F420-reducing hydrogenase, beta subunit
L1_007_000M1_scaffold_83_57
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50646..51584)
DNA (939bp) protein (313aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPZ8_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCX82268.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_000M1_scaffold_83_58
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51587..52180)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82267.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
exopolysaccharide biosynthesis protein
L1_007_000M1_scaffold_83_59
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52188..53132)
DNA (945bp) protein (315aa)
Glycosyltransferase group 2 family protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E222_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCX82266.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_000M1_scaffold_83_60
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53145..53756)
DNA (612bp) protein (204aa)
Serine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPQ9_9FIRM
Serine acetyltransferase {ECO:0000313|EMBL:CCX82265.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
putative acetyltransferase
Displaying items 31-60 of 198 in total

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