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L1_007_000M1_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_83_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(502..1077)
DNA (576bp) protein (192aa)
Sel1 repeat n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS68_9FIRM
Sel1 repeat.
Sel1 repeat {ECO:0000313|EMBL:CCX83115.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1365..2003
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83117.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2100..2468)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83118.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2626..3522)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83128.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3776..5131
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7G4_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5214..5636)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83132.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Ion channel.
L1_007_000M1_scaffold_83_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6922..7671
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83135.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CRISPR-associated protein Cas6
L1_007_000M1_scaffold_83_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7668..10103
DNA (2436bp) protein (812aa)
CRISPR-associated protein Csm1 family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2W6_9FIRM
CRISPR-associated protein Csm1 family {ECO:0000313|EMBL:CCX83137.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CRISPR-associated protein, Csm1 family
L1_007_000M1_scaffold_83_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10072..10599
DNA (528bp) protein (176aa)
CRISPR-associated protein Csm2 family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSH5_9FIRM
CRISPR-associated protein Csm2 family {ECO:0000313|EMBL:CCX83138.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CRISPR-associated protein, Csm2 family
L1_007_000M1_scaffold_83_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10612..11277
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83142.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11274..12191
DNA (918bp) protein (306aa)
CRISPR-associated RAMP protein Csm4 family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW60_9FIRM
CRISPR-associated RAMP protein Csm4 family {ECO:0000313|EMBL:CCX83144.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CRISPR-associated RAMP protein, Csm4 family
L1_007_000M1_scaffold_83_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12194..13270
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83146.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13267..14658
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83148.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CRISPR-associated protein Csm6
L1_007_000M1_scaffold_83_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..15422)
DNA (603bp) protein (201aa)
Radical SAM superfamily n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW62_9FIRM
Radical SAM superfamily {ECO:0000313|EMBL:CCX83149.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Radical SAM superfamily.
L1_007_000M1_scaffold_83_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15453..16004)
DNA (552bp) protein (184aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2X9_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCX83152.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16015..16869)
DNA (855bp) protein (285aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal/pyridoxine/pyridoxamine kinase n=2 Tax=Ruminococcus RepID=D4L7G1_9FIRM
L1_007_000M1_scaffold_83_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17049..17324)
DNA (276bp) protein (92aa)
Addiction module toxin Txe/YoeB family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW66_9FIRM
Addiction module toxin Txe/YoeB family {ECO:0000313|EMBL:CCX83154.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
txe/YoeB family addiction module toxin
L1_007_000M1_scaffold_83_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17314..17553)
DNA (240bp) protein (80aa)
Prevent-host-death family protein n=2 Tax=Ruminococcus RepID=D4L7G0_9FIRM
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBL15555.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17827..18270
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15554.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18319..18540)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83157.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18623..18955)
DNA (333bp) protein (111aa)
Cupin domain n=2 Tax=Ruminococcus RepID=D4L7F8_9FIRM
Cupin domain.
Cupin domain {ECO:0000313|EMBL:CBL15553.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18986..19474)
DNA (489bp) protein (163aa)
Sortase and related acyltransferases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F7_9FIRM
Sortase and related acyltransferases
Sortase and related acyltransferases {ECO:0000313|EMBL:CCX83159.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19782..20963
DNA (1182bp) protein (394aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
S-adenosylmethionine synthase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F6_9FIRM
L1_007_000M1_scaffold_83_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21245..21616)
DNA (372bp) protein (124aa)
Endoribonuclease L-PSP, putative n=2 Tax=Ruminococcus RepID=D4L7F5_9FIRM
endoribonuclease L-PSP, putative
Endoribonuclease L-PSP, putative {ECO:0000313|EMBL:CBL15550.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21654..22847)
DNA (1194bp) protein (398aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:CBL15549.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBL15549.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L-threonine ammonia-lyase n=2 Tax=Ruminococcus RepID=D4L7F4_9FIRM
L1_007_000M1_scaffold_83_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23093..23515)
DNA (423bp) protein (141aa)
Flavodoxin, short chain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F3_9FIRM
flavodoxin, short chain
Flavodoxin, short chain {ECO:0000313|EMBL:CBL15548.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23561..24115)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E4S4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15547.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24534..25490)
DNA (957bp) protein (319aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=root RepID=R5E2Z2_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCX83167.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
AraC-type DNA-binding domain-containing proteins
L1_007_000M1_scaffold_83_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25506..25877)
DNA (372bp) protein (124aa)
Heavy-metal-associated domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F0_9FIRM
Heavy-metal-associated domain.
Heavy-metal-associated domain {ECO:0000313|EMBL:CBL15545.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26020..26193)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DW79_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15542.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 198 in total

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