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L1_007_000M1_scaffold_83

Search features with annotation key words

Displaying items 181-198 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_83_181
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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183509..184720
DNA (1212bp) protein (404aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L716_9FIRM
L1_007_000M1_scaffold_83_182
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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184710..185822
DNA (1113bp) protein (371aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUZ0_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CCX83978.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_183
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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185851..187278
DNA (1428bp) protein (476aa)
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484, ECO:0000313|EMBL:CBL15409.1};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glycogen synthase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L714_9FIRM
L1_007_000M1_scaffold_83_184
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(187532..188104)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L713_9FIRM
Protein of unknown function (DUF1393).
Uncharacterized protein {ECO:0000313|EMBL:CBL15408.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_185
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(188364..189026)
DNA (663bp) protein (221aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E773_9FIRM
Predicted membrane protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_186
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(189289..190014)
DNA (726bp) protein (242aa)
Predicted DNA alkylation repair enzyme n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5F5_9FIRM
Predicted DNA alkylation repair enzyme {ECO:0000313|EMBL:CCX83982.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted DNA alkylation repair enzyme
L1_007_000M1_scaffold_83_187
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(190030..190920)
DNA (891bp) protein (297aa)
LPS biosynthesis protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L710_9FIRM
LPS biosynthesis protein
LPS biosynthesis protein {ECO:0000313|EMBL:CBL15405.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_188
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(190950..192011)
DNA (1062bp) protein (354aa)
Glycosyltransferases, probably involved in cell wall biogenesis n=2 Tax=Ruminococcus RepID=D4L709_9FIRM
Glycosyltransferases, probably involved in cell wall biogenesis
Glycosyltransferases, probably involved in cell wall biogenesis {ECO:0000313|EMBL:CBL15404.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_189
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(192023..192817)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E781_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83986.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Protein of unknown function (DUF975).
L1_007_000M1_scaffold_83_190
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192854..194215)
DNA (1362bp) protein (454aa)
dipeptidase, putative (EC:3.5.1.18)
Dipeptidase, putative {ECO:0000313|EMBL:CBL15402.1}; EC=3.5.1.18 {ECO:0000313|EMBL:CBL15402.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Dipeptidase, putative n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L707_9FIRM
L1_007_000M1_scaffold_83_191
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(194255..196714)
DNA (2460bp) protein (820aa)
Bacterial membrane protein YfhO n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYL0_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CCX83989.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Bacterial membrane protein YfhO.
L1_007_000M1_scaffold_83_192
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196974..197561
DNA (588bp) protein (196aa)
Predicted hydrolases of HD superfamily (EC:3.1.3.5)
Predicted hydrolases of HD superfamily {ECO:0000313|EMBL:CBL15400.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CBL15400.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Predicted hydrolases of HD superfamily n=2 Tax=Ruminococcus RepID=D4L705_9FIRM
L1_007_000M1_scaffold_83_193
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

197722..198906
DNA (1185bp) protein (395aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUU2_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCX83995.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
cell envelope-related function transcriptional attenuator common domain
L1_007_000M1_scaffold_83_194
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(199215..200537)
DNA (1323bp) protein (441aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5I9_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCX83997.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
cell envelope-related function transcriptional attenuator common domain
L1_007_000M1_scaffold_83_195
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(200521..201351)
DNA (831bp) protein (277aa)
Sortase SrtB family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYP6_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CCX83999.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sortase, SrtB family
L1_007_000M1_scaffold_83_196
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(201511..202011)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84000.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_197
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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202274..203188
DNA (915bp) protein (305aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Quinolinate synthetase A n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5J3_9FIRM
quinolinate synthetase A
L1_007_000M1_scaffold_83_198
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

203228..204301
DNA (1074bp) protein (358aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Ruminococcus RepID=D4L6Z9_9FIRM
Displaying items 181-198 of 198 in total

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