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L1_007_000M1_scaffold_83

Search features with annotation key words

Displaying items 121-150 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_83_121
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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114859..115113
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83880.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
regulatory protein ArsR
L1_007_000M1_scaffold_83_122
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115125..115793
DNA (669bp) protein (223aa)
Predicted integral membrane protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L777_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL15472.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_123
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115873..117999)
DNA (2127bp) protein (709aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E541_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCX83882.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L1_007_000M1_scaffold_83_124

Not on your lists

comp(117999..118256)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=root RepID=K1TWL8_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC74328.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_83_125
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118400..119182)
DNA (783bp) protein (261aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DY85_9FIRM
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CCX83884.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted divalent heavy-metal cations transporter
L1_007_000M1_scaffold_83_126
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(119294..122443)
DNA (3150bp) protein (1050aa)
ATPase involved in DNA repair n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUG7_9FIRM
ATPase involved in DNA repair {ECO:0000313|EMBL:CCX83885.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ATPase involved in DNA repair
L1_007_000M1_scaffold_83_127
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122430..123596)
DNA (1167bp) protein (389aa)
Exonuclease SbcD n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L772_9FIRM
exonuclease SbcD
Exonuclease SbcD {ECO:0000313|EMBL:CBL15467.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_128
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123665..123970)
DNA (306bp) protein (102aa)
Branched-chain amino acid transport protein (AzlD) n=2 Tax=Ruminococcus RepID=D4L771_9FIRM
Branched-chain amino acid transport protein (AzlD).
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:CCX83887.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_129
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123960..124703)
DNA (744bp) protein (248aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L770_9FIRM
Predicted branched-chain amino acid permease (azaleucine resistance)
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CBL15465.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_130
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

125212..125610
DNA (399bp) protein (133aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUH0_9FIRM
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:CCX83890.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Anti-sigma regulatory factor (Ser/Thr protein kinase)
L1_007_000M1_scaffold_83_131
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

125778..126086
DNA (309bp) protein (103aa)
Anti-sigma factor antagonist n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E551_9FIRM
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_132
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126096..127856
DNA (1761bp) protein (587aa)
Na+-driven multidrug efflux pump n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L765_9FIRM
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL15460.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Na+-driven multidrug efflux pump
L1_007_000M1_scaffold_83_133
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127875..135206
DNA (7332bp) protein (2444aa)
Amino acid adenylation domain n=2 Tax=root RepID=D4L764_9FIRM
Amino acid adenylation domain {ECO:0000313|EMBL:CBL15459.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
amino acid adenylation domain
L1_007_000M1_scaffold_83_134
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135842..136549
DNA (708bp) protein (236aa)
Two component transcriptional regulator LytTR family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUQ7_9FIRM
Two component transcriptional regulator LytTR family {ECO:0000313|EMBL:CCX83898.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
two component transcriptional regulator, LytTR family
L1_007_000M1_scaffold_83_135
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

136553..137830
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83900.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_136
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137823..138356)
DNA (534bp) protein (178aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CBL15455.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CBL15455.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
O-6-methylguanine DNA methyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L760_9FIRM
L1_007_000M1_scaffold_83_137
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138436..138819)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L759_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15454.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_138
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138837..139037)
DNA (201bp) protein (67aa)
TM2 domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUS5_9FIRM
TM2 domain {ECO:0000313|EMBL:CCX83913.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
TM2 domain.
L1_007_000M1_scaffold_83_139
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139207..140895)
DNA (1689bp) protein (563aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYC3_9FIRM
L1_007_000M1_scaffold_83_140
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140895..141794)
DNA (900bp) protein (300aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CBL15451.1}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CBL15451.1};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L756_9FIRM
L1_007_000M1_scaffold_83_141
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141836..142150)
DNA (315bp) protein (105aa)
Ferredoxin n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6Z9_9FIRM
Ferredoxin {ECO:0000313|EMBL:CCX83916.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Ferredoxin
L1_007_000M1_scaffold_83_142
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142134..143816)
DNA (1683bp) protein (561aa)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (EC:1.8.99.2)
Succinate dehydrogenase/fumarate reductase flavoprotein subunit n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E582_9FIRM
Succinate dehydrogenase/fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CCX83917.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_143
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143837..144748)
DNA (912bp) protein (304aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CBL15448.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CBL15448.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Thioredoxin-disulfide reductase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L753_9FIRM
L1_007_000M1_scaffold_83_144
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144761..145171)
DNA (411bp) protein (137aa)
Predicted metal-dependent protease of the PAD1/JAB1 superfamily n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L752_9FIRM
Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Predicted metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:CBL15447.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_145
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145168..145980)
DNA (813bp) protein (271aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L751_9FIRM
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 {ECO:0000313|EMBL:CBL15446.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_146
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145980..146186)
DNA (207bp) protein (69aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Ruminococcus RepID=D4L750_9FIRM
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CCX83921.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_147
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146192..146515)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYD6_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
thioredoxin
L1_007_000M1_scaffold_83_148
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146516..146761)
DNA (246bp) protein (82aa)
Predicted redox protein, regulator of disulfide bond formation n=2 Tax=Ruminococcus RepID=D4L748_9FIRM
Predicted redox protein, regulator of disulfide bond formation
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:CBL15443.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_149
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146754..147614)
DNA (861bp) protein (287aa)
Dissimilatory sulfite reductase (Desulfoviridin) alpha and beta subunits n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUU1_9FIRM
Dissimilatory sulfite reductase (Desulfoviridin) alpha and beta subunits {ECO:0000313|EMBL:CCX83928.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L1_007_000M1_scaffold_83_150
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(147620..148867)
DNA (1248bp) protein (416aa)
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrylase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E715_9FIRM
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:CCX83931.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying items 121-150 of 198 in total

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