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L1_007_000M1_scaffold_83

Search features with annotation key words

Displaying items 91-120 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_83_91
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(87578..88639)
DNA (1062bp) protein (354aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CBL15497.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBL15497.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Tryptophanyl-tRNA synthetase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7A2_9FIRM
L1_007_000M1_scaffold_83_92
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88881..89567
DNA (687bp) protein (229aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUH9_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CCX83823.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_93
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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89608..89850
DNA (243bp) protein (81aa)
Acyl-carrier protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUA7_9FIRM
Acyl-carrier protein {ECO:0000313|EMBL:CCX83825.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_94
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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89852..92050
DNA (2199bp) protein (733aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.179)
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DY29_9FIRM
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:CCX83829.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_95
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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92066..92800
DNA (735bp) protein (245aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL15494.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBL15494.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L799_9FIRM
L1_007_000M1_scaffold_83_96
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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92797..93252
DNA (456bp) protein (152aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase {ECO:0000313|EMBL:CBL15493.1}; EC=4.2.1.- {ECO:0000313|EMBL:CBL15493.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L798_9FIRM
L1_007_000M1_scaffold_83_97
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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93255..93959
DNA (705bp) protein (235aa)
Flavodoxin-like fold n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L797_9FIRM
Flavodoxin-like fold.
Flavodoxin-like fold {ECO:0000313|EMBL:CBL15492.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_98
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93960..94541)
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4Y8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX83837.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transcriptional regulator
L1_007_000M1_scaffold_83_99
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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94606..95445
DNA (840bp) protein (280aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L795_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL15490.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_100
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95641..96180
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DY37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83839.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_101
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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96265..96780
DNA (516bp) protein (172aa)
Transcriptional regulator, MerR family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L794_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBL15489.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_102
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96847..97038)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83841.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_103
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97177..97659
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4Z3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCX83842.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA-directed RNA polymerase subunit sigma
L1_007_000M1_scaffold_83_104
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97646..98362
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L793_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15488.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_105
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98423..98833
DNA (411bp) protein (137aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Peptide deformylase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L792_9FIRM
N-formylmethionyl-tRNA deformylase
L1_007_000M1_scaffold_83_106
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99114..99575
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83845.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_107
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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99590..100105
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L788_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15483.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_108
unknown

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comp(100128..100223)
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_000M1_scaffold_83_109
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

100311..100565
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83858.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_110
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100641..101150)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83860.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
major facilitator superfamily permease
L1_007_000M1_scaffold_83_111
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101191..101769)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83861.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_007_000M1_scaffold_83_112
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101895..102230
DNA (336bp) protein (112aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUM1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX83863.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
putative transcriptional regulator
L1_007_000M1_scaffold_83_113
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102286..104895)
DNA (2610bp) protein (870aa)
Small GTP-binding protein domain n=2 Tax=root RepID=R5DUF0_9FIRM
Small GTP-binding protein domain {ECO:0000313|EMBL:CCX83865.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
small GTP-binding protein domain
L1_007_000M1_scaffold_83_114
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104930..105406)
DNA (477bp) protein (159aa)
Acetyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6V5_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CCX83866.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Acetyltransferases
L1_007_000M1_scaffold_83_115
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

105800..106342
DNA (543bp) protein (181aa)
UPF0340 protein BN462_01279 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E522_9FIRM
UPF0340 protein BN462_01279 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
conserved hypothetical protein TIGR01440
L1_007_000M1_scaffold_83_116
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106525..109239
DNA (2715bp) protein (905aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DY67_9FIRM
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CCX83869.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_007_000M1_scaffold_83_117
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109542..110645
DNA (1104bp) protein (368aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E528_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX83872.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_118
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110707..111273)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DY73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83874.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_007_000M1_scaffold_83_119
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(111326..112690)
DNA (1365bp) protein (455aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L780_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL15475.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_000M1_scaffold_83_120
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(113227..114525)
DNA (1299bp) protein (433aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL15473.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL15473.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Enolase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L778_9FIRM
Displaying items 91-120 of 198 in total

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