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L1_007_000M1_scaffold_30

Search features with annotation key words

Displaying items 61-90 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_30_61
unknown

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comp(80447..80719)
DNA (273bp) protein (91aa)

This feature has no annotations

L1_007_000M1_scaffold_30_62
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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80746..81597
DNA (852bp) protein (284aa)
Putative ribosomal RNA large subunit methyltransferase A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6X4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05953.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_63
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81601..82569
DNA (969bp) protein (323aa)
Glycoside Hydrolase Family 113 protein (putative beta-1,4-mannanase) (EC:3.2.1.78)
Glycoside Hydrolase Family 113 protein (Putative beta-1,4-mannanase) {ECO:0000313|EMBL:CCO05952.1}; EC=3.2.1.78 {ECO:0000313|EMBL:CCO05952.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF88_9FIRM
L1_007_000M1_scaffold_30_64
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82757..83248)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2W6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05951.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_65
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83530..84774)
DNA (1245bp) protein (415aa)
ahcY; Adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Adenosylhomocysteinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA06_9FIRM
L1_007_000M1_scaffold_30_66
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85176..86576
DNA (1401bp) protein (467aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE4_9FIRM
mgtE2; Magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_67
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86681..88060
DNA (1380bp) protein (460aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W9_9FIRM
hypothetical protein
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:CDC66507.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_68
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88120..88731)
DNA (612bp) protein (204aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF84_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05947.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_69
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88744..89454)
DNA (711bp) protein (237aa)
livF; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
Branched-chain amino acid ABC ATPase component {ECO:0000313|EMBL:CCO05946.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05946.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Amino acid/amide ABC transporter ATP-binding protein 2 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2V7_9FIRM
L1_007_000M1_scaffold_30_70
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89468..90226)
DNA (759bp) protein (253aa)
livG; branched-chain amino acid ABC ATPase component (EC:3.6.3.-)
Branched-chain amino acid ABC ATPase component {ECO:0000313|EMBL:CCO05945.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05945.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Z9_9FIRM
L1_007_000M1_scaffold_30_71
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90228..91322)
DNA (1095bp) protein (365aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE0_9FIRM
livM; branched-chain amino acid ABC transporter membrane component
Branched-chain amino acid ABC transporter membrane component {ECO:0000313|EMBL:CCO05944.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_72
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(91391..92272)
DNA (882bp) protein (294aa)
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6W4_9FIRM
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CDC66502.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
livH; branched-chain amino acid ABC transporter membrane component
L1_007_000M1_scaffold_30_73
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92492..93694)
DNA (1203bp) protein (401aa)
Receptor family ligand-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF77_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:CDC66501.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
livK; branched-chain amino acid extracellular binding protein
L1_007_000M1_scaffold_30_74
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94008..94250
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2U7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05941.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_75
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94234..94497
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9Y8_9FIRM
cotJB; Spore coat protein JB
Spore coat protein JB {ECO:0000313|EMBL:CCO05940.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_76
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94497..95093
DNA (597bp) protein (199aa)
CotJC protein n=1 Tax=Ruminococcus albus 8 RepID=E9SGX0_RUMAL
cotJC; Spore coat protein JC
Spore coat protein JC {ECO:0000313|EMBL:CCO05939.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_77
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95140..95817)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66341.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_78
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96167..96343
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66340.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_79
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96383..97018)
DNA (636bp) protein (212aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E7_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC66339.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sortase family protein, putative
L1_007_000M1_scaffold_30_80
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97062..98042)
DNA (981bp) protein (327aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYS3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05936.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_81
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98032..98955)
DNA (924bp) protein (308aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U661_9FIRM
srtA; Sortase family protein
Sortase family protein {ECO:0000313|EMBL:CDC66337.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_82
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99019..100407)
DNA (1389bp) protein (463aa)
Cna protein B-type domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEP1_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:CDC66336.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_83
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100346..105352)
DNA (5007bp) protein (1669aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2A0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05933.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_84
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105397..105999)
DNA (603bp) protein (201aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sip3; Signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E3_9FIRM
L1_007_000M1_scaffold_30_85
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105986..106222)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66333.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_30_86
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106740..106934)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U655_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05930.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_87
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106944..107387)
DNA (444bp) protein (148aa)
Transcriptional regulator MarR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEN6_9FIRM
Transcriptional regulator, MarR family
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDC66331.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_88
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107698..107979
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66330.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_30_89
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108147..110291
DNA (2145bp) protein (715aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ppk2; K00937 polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9E0_9FIRM
L1_007_000M1_scaffold_30_90
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110379..112049)
DNA (1671bp) protein (557aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYR1_9FIRM
Displaying items 61-90 of 156 in total

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