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L1_007_000M1_scaffold_30

Search features with annotation key words

Displaying items 121-150 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_30_121
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147408..148061)
DNA (654bp) protein (218aa)
cysE; Serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CCO05894.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T130_9FIRM
L1_007_000M1_scaffold_30_122
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148375..148953)
DNA (579bp) protein (193aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCO05893.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CCO05893.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBV3_9FIRM
L1_007_000M1_scaffold_30_123
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148970..150298)
DNA (1329bp) protein (443aa)
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.1.1.-)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4N9_9FIRM
L1_007_000M1_scaffold_30_124
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(150785..151633)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH04_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05891.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_125
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(151645..152265)
DNA (621bp) protein (207aa)
Regulatory protein RecX n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8P5_9FIRM
recX; Regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_126
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(152269..153519)
DNA (1251bp) protein (417aa)
recA; Recombination protein RecA (EC:3.6.3.8)
Protein RecA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T134_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_127
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(153634..154455)
DNA (822bp) protein (274aa)
hemK; M|ethyltransferase, HemK family (EC:2.1.1.-)
M|ethyltransferase, HemK family {ECO:0000313|EMBL:CCO05888.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCO05888.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Protein-(Glutamine-N5) methyltransferase release factor-specific n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBV7_9FIRM
L1_007_000M1_scaffold_30_128
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154449..155411)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4P3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05887.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_129
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155441..156946)
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Two-component system sensor histidine kinase (EC:2.7.3.-)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH08_9FIRM
L1_007_000M1_scaffold_30_130
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(156981..157685)
DNA (705bp) protein (235aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8Q0_9FIRM
Two-component system transcriptional regulator
Two-component system transcriptional regulator {ECO:0000313|EMBL:CCO05885.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_131
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(157707..159041)
DNA (1335bp) protein (445aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T137_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05884.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_132
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(159167..160513)
DNA (1347bp) protein (449aa)
Citrate synthase (EC:2.3.3.1)
Citrate (Si)-synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBW2_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CCO05883.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_133
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

160726..161712
DNA (987bp) protein (329aa)
SpoIID/LytB domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4P8_9FIRM
spoIID; Stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:CCO05882.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_134
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(161687..162016)
DNA (330bp) protein (110aa)
Cupin domain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH12_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05881.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_135
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(162141..163394)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67172.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_30_136
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163633..164280)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T142_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67173.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L1_007_000M1_scaffold_30_137
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(164431..164835)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67174.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_138
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

165027..165251
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4Q2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05877.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_139
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

165248..166402
DNA (1155bp) protein (385aa)
Cysteine desulfurase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH14_9FIRM
cysteine desulfurase family protein
Cysteine desulfurase {ECO:0000313|EMBL:CDC67176.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_140
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

166524..166937
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8Q8_9FIRM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDC67177.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_141
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

166948..167535
DNA (588bp) protein (196aa)
putative phosphinothricin acetyltransferase (EC:2.3.1.183)
Putative phosphinothricin acetyltransferase {ECO:0000313|EMBL:CCO05874.1}; EC=2.3.1.183 {ECO:0000313|EMBL:CCO05874.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T145_9FIRM
L1_007_000M1_scaffold_30_142
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

167588..168700
DNA (1113bp) protein (371aa)
pheA; P-protein (Prephenate dehydratase/chorismate mutase) (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBX2_9FIRM
Prephenate dehydratase {ECO:0000313|EMBL:CDC67179.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_143
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

168732..169205
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4Q6_9FIRM
L1_007_000M1_scaffold_30_144
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(169256..171496)
DNA (2241bp) protein (747aa)
Cell wall binding repeat-containing protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH19_9FIRM
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:CDC67181.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_145
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

171908..172387
DNA (480bp) protein (160aa)
Transcriptional regulator AsnC family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T724_9FIRM
Transcriptional regulator, AsnC family
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDC65524.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_146
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

172384..173568
DNA (1185bp) protein (395aa)
aminotransferase class I and II (EC:2.6.1.-)
Putative aspartate transaminase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCH5_9FIRM
Putative aspartate transaminase {ECO:0000313|EMBL:CDC65526.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_147
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

173552..174433
DNA (882bp) protein (294aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U432_9FIRM
L1_007_000M1_scaffold_30_148
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

174447..175541
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWK3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05867.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_149
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

175538..176434
DNA (897bp) protein (299aa)
Radical SAM domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T729_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDC65529.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_150
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

176667..177197
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZZ1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC65530.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying items 121-150 of 156 in total

View Taxonomy