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L1_007_000M1_scaffold_30

Search features with annotation key words

Displaying items 91-120 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_30_91
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112606..114165
DNA (1560bp) protein (520aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
galT; Galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U649_9FIRM
L1_007_000M1_scaffold_30_92
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

114177..115040
DNA (864bp) protein (288aa)
Cell wall-binding repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEN0_9FIRM
hypothetical protein
Cell wall-binding repeat protein {ECO:0000313|EMBL:CDC66326.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_93
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115027..117546
DNA (2520bp) protein (840aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T289_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66325.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_94
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117665..118225)
DNA (561bp) protein (187aa)
Regulatory protein TetR n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9D6_9FIRM
Transcriptional regulator, TetR family
Regulatory protein TetR {ECO:0000313|EMBL:CDC66324.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_95
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118413..120197
DNA (1785bp) protein (595aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
1 4-alpha-glucan branching enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYQ6_9FIRM
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
L1_007_000M1_scaffold_30_96
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

120317..121009
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6U644_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66322.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_97
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121025..122023
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEM5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66321.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_98
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122235..122771)
DNA (537bp) protein (179aa)
Nitroreductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T283_9FIRM
Nitroreductase {ECO:0000313|EMBL:CDC66320.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_99
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

122921..123622
DNA (702bp) protein (234aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO05917.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05917.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9D1_9FIRM
L1_007_000M1_scaffold_30_100
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

123634..125886
DNA (2253bp) protein (751aa)
Glycoside Hydrolase Family 74 protein {ECO:0000313|EMBL:CCO05916.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCO05916.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glycoside Hydrolase Family 74 protein (EC:3.2.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYQ0_9FIRM
L1_007_000M1_scaffold_30_101
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

125932..126594
DNA (663bp) protein (221aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U635_9FIRM
L1_007_000M1_scaffold_30_102
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


127019..127219
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEL8_9FIRM
rpmE; ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_103
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127275..127895
DNA (621bp) protein (207aa)
YigZ family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T279_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05913.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_104
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128015..129010
DNA (996bp) protein (332aa)
dgt; Putative dGTPase (EC:3.1.5.1)
Putative dGTPase {ECO:0000313|EMBL:CCO05912.1}; EC=3.1.5.1 {ECO:0000313|EMBL:CCO05912.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative dGTPase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9C7_9FIRM
L1_007_000M1_scaffold_30_105
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129034..130797
DNA (1764bp) protein (588aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYP4_9FIRM
L1_007_000M1_scaffold_30_106
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

130840..131940
DNA (1101bp) protein (367aa)
RNA polymerase sigma factor SigA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U631_9FIRM
rpoD; RNA polymerase sigma factor RpoD
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_107
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

131957..132415
DNA (459bp) protein (153aa)
Transcriptional regulator Rrf2 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEL4_9FIRM
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDC66311.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rrf2; Putative transcriptional regulator, Rrf2 family
L1_007_000M1_scaffold_30_108
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132387..133250
DNA (864bp) protein (288aa)
lysozyme (Glycosyl hydrolases, family 25) (EC:3.2.1.17)
Glycoside hydrolase family 25 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T276_9FIRM
Glycoside hydrolase family 25 {ECO:0000313|EMBL:CDC66310.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_109
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133364..133612)
DNA (249bp) protein (83aa)
Putative transition state regulatory protein AbrB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9C4_9FIRM
abrB; Transition state regulator AbrB
Transition state regulator AbrB {ECO:0000313|EMBL:CCO05907.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_110
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133792..134391
DNA (600bp) protein (200aa)
Transporter gate domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYN7_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CDC66308.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
spmA; Spore maturation protein A
L1_007_000M1_scaffold_30_111
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134348..134896
DNA (549bp) protein (183aa)
Putative spore maturation protein B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U627_9FIRM
spmB; Spore maturation protein B
Spore maturation protein B {ECO:0000313|EMBL:CCO05905.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_112
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134964..136526
DNA (1563bp) protein (521aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hcp; Hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEL0_9FIRM
L1_007_000M1_scaffold_30_113
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

136663..138132
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T272_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66305.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_114
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

138163..139023
DNA (861bp) protein (287aa)
YitT family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9B9_9FIRM
YitT family protein {ECO:0000313|EMBL:CDC66304.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_115
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

139187..140068
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UDE2_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05900.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_116
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

140056..141327
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U619_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05899.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_117
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

141388..142980
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEK0_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDC66296.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_30_118
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143168..144604)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4N5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05897.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_30_119
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145074..145955)
DNA (882bp) protein (294aa)
ppiB; Putative peptidyl-prolyl cis-trans isomerase Short=PPIase; Short=Rotamase (EC:5.2.1.8)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TH01_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67156.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_30_120
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145967..147382)
DNA (1416bp) protein (472aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cysteine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8P2_9FIRM
Displaying items 91-120 of 156 in total

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