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L1_008_000M1_scaffold_43

Search features with annotation key words

Displaying items 31-60 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_43_31
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32810..33910)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P115_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52929.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_32
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34425..35792)
DNA (1368bp) protein (456aa)
Peptidase family M20A protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ06_BIFBS
peptidase family M20A protein
Peptidase family M20A protein {ECO:0000313|EMBL:ADO52928.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_33
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35935..36537
DNA (603bp) protein (201aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=E4V8Y2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16479.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_43_34
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36790..38280
DNA (1491bp) protein (497aa)
PdhD Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:KFI42758.1}; EC=1.8.1.4 {ECO:0000313|EMBL:KFI42758.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
pdhD; dihydrolipoamide dehydrogenase PdhD (EC:1.8.1.4)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BY83_BIFBI
L1_008_000M1_scaffold_43_35
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38387..39184
DNA (798bp) protein (266aa)
Integral membrane protein n=5 Tax=Bifidobacterium RepID=I3WHB2_BIFBI
integral membrane protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42757.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_43_36
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39501..40949
DNA (1449bp) protein (483aa)
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glutamine synthetase n=8 Tax=Bifidobacterium RepID=E3EQ02_BIFBS
L1_008_000M1_scaffold_43_37
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41335..42168
DNA (834bp) protein (278aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WHA1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22089.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_38
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42296..43426)
DNA (1131bp) protein (377aa)
ATP-binding protein involved in chromosome partitioning n=2 Tax=Bifidobacterium bifidum RepID=E3EPZ0_BIFBS
mrp; ATP-binding Mrp-like protein
ATP-binding protein involved in chromosome partitioning {ECO:0000313|EMBL:ADO52912.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_39
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43652..46354)
DNA (2703bp) protein (901aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
ligA; DNA ligase, NAD-dependent protein (EC:6.5.1.2)
DNA ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7D7_BIFBI
L1_008_000M1_scaffold_43_40
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46441..49929)
DNA (3489bp) protein (1163aa)
TPR repeat-containing protein n=3 Tax=Bifidobacterium RepID=R6GNH3_9BIFI
TPR repeat-containing protein {ECO:0000313|EMBL:CDB22801.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L1_008_000M1_scaffold_43_41
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50022..52193
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPW5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50830.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative PMT family glycosyl transferase
L1_008_000M1_scaffold_43_42
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52363..52782
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8W2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50054.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
arylsulfotransferase domain (ASST)
L1_008_000M1_scaffold_43_43
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52875..53663
DNA (789bp) protein (263aa)
Cobalt/nickel transport system, ATP-binding protein n=5 Tax=Bifidobacterium RepID=E3EPY5_BIFBS
cobalt/nickel transport system, ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB22796.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_44
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53788..54900)
DNA (1113bp) protein (371aa)
aminotransferase (EC:2.6.1.1)
Aminotransferase n=6 Tax=Bifidobacterium bifidum RepID=E4P103_BIFBP
Putative amino transferase {ECO:0000313|EMBL:AFL04257.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_43_45
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55072..55833)
DNA (762bp) protein (254aa)
ppgK; polyphosphate glucokinase/Transcriptional regulator (EC:2.7.1.63)
PpgK Polyphosphate glucokinase/Transcriptional regulator {ECO:0000313|EMBL:KFI42742.1}; EC=2.7.1.63 {ECO:0000313|EMBL:KFI42742.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PpgK Polyphosphate glucokinase/Transcriptional regulator n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P102_BIFBP
L1_008_000M1_scaffold_43_46
unknown

Not on your lists

comp(55826..55981)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_43_47
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56208..56828
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2IPX1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50835.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000M1_scaffold_43_48
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56996..59458
DNA (2463bp) protein (821aa)
Fused ATP-binding protein and permease of ABC transporter (EC:3.6.3.17)
Fused ATP binding protein and permease of ABC transporter n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P100_BIFBP
Cobalt/nickel transport system, permease protein {ECO:0000313|EMBL:ADO52903.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_49
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59483..60949)
DNA (1467bp) protein (489aa)
Transporter n=2 Tax=Bifidobacterium bifidum RepID=E4P0Z9_BIFBP
putative efflux-type transporter
Putative efflux-type transporter {ECO:0000313|EMBL:AFL04253.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_43_50
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60953..61153
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GEH9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22790.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_51
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61123..62529)
DNA (1407bp) protein (469aa)
AAA family ATPase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPX9_BIFBS
AAA ATPase
AAA family ATPase {ECO:0000313|EMBL:ADO52901.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_52
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62628..65189)
DNA (2562bp) protein (854aa)
Putative helicase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH88_BIFBI
Putative helicase {ECO:0000313|EMBL:AFL04251.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
helY; putative helicase
L1_008_000M1_scaffold_43_53
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(65247..66323)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPX7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52899.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_54
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66453..67541)
DNA (1089bp) protein (363aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8V1_BIFBI
ABC transporter, permease protein {ECO:0000313|EMBL:EFR50043.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
gluD; glutamate transport system permease GluD
L1_008_000M1_scaffold_43_55
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67546..68223)
DNA (678bp) protein (226aa)
Glutamate transport system permease protein GluC n=6 Tax=Bifidobacterium RepID=E3EPX5_BIFBS
gluc; glutamate transport system permease gluc
ABC transporter, permease protein {ECO:0000313|EMBL:ERI83148.1}; Glutamate ABC transporter permease component {ECO:0000313|EMBL:BAQ97867.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_43_56
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68225..69064)
DNA (840bp) protein (280aa)
Glutamate-binding protein GluB n=3 Tax=Bifidobacterium bifidum RepID=E3EPX4_BIFBS
gluB; glutamate-binding protein GluB
Glutamate-binding protein GluB {ECO:0000313|EMBL:ADO52896.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_57
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69080..69850)
DNA (771bp) protein (257aa)
gluA; glutamate transport ATP-binding protein GluA (EC:3.6.3.31)
ATP-binding protein transporter for glutamate n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GBF9_9BIFI
ATP-binding protein transporter for glutamate {ECO:0000313|EMBL:CDB22783.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_58
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69975..70481)
DNA (507bp) protein (169aa)
YbaK/proline--tRNA ligase associated domain protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8U7_BIFBI
YbaK / prolyl-tRNA synthetases associated domain
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EFR50038.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_43_59
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70679..71023)
DNA (345bp) protein (115aa)
Response regulator protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WH81_BIFBI
vraR; response regulator protein
Response regulator protein {ECO:0000313|EMBL:AFL04244.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_43_60
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(71411..73207)
DNA (1797bp) protein (599aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Bifidobacterium RepID=E4V8U3_BIFBI
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDB22780.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying items 31-60 of 164 in total

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