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L1_008_000M1_scaffold_43

Search features with annotation key words

Displaying items 61-90 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_43_61
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(73291..74685)
DNA (1395bp) protein (465aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Histidyl-tRNA synthetase n=2 Tax=Bifidobacterium bifidum RepID=E3EPW9_BIFBS
hisS; histidyl-tRNA synthetase
L1_008_000M1_scaffold_43_62
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74774..76195
DNA (1422bp) protein (474aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4V8U1_BIFBI
DNA repair related putative ATPase
DNA repair related putative ATPase {ECO:0000313|EMBL:EKF15077.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_43_63
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76612..76749
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPW7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52889.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_64
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76763..76990)
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4V8T9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42727.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L1_008_000M1_scaffold_43_65
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76966..77181)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WH74_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15073.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_43_66
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77541..80117)
DNA (2577bp) protein (859aa)
ATP-dependent clp protease n=11 Tax=Bifidobacterium RepID=E3EPW4_BIFBS
clpC; genetic competence regulator ClpC
Genetic competence regulator ClpC {ECO:0000313|EMBL:EKE50853.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000M1_scaffold_43_67
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80254..81249
DNA (996bp) protein (332aa)
Universal stress protein family n=6 Tax=Bifidobacterium RepID=E3EPW3_BIFBS
uspA; universal stress protein
Universal stress protein family {ECO:0000313|EMBL:KFI42725.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_43_68
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81400..82473)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8T5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50027.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_000M1_scaffold_43_69
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82492..82881)
DNA (390bp) protein (130aa)
Cold shock protein n=7 Tax=Bifidobacterium RepID=E3EPW1_BIFBS
cspB; Cold shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFR50026.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_43_70
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82998..84947)
DNA (1950bp) protein (650aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Two-component system histidine kinase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNE5_9BIFI
two-component system histidine kinase
L1_008_000M1_scaffold_43_71
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(84958..85695)
DNA (738bp) protein (246aa)
Two-component response regulator n=6 Tax=Bifidobacterium bifidum RepID=E3EPV9_BIFBS
two-component response regulator
Response regulator of two-component system {ECO:0000313|EMBL:AFL04231.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_43_72
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85679..86809)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MDP3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15442.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L1_008_000M1_scaffold_43_73
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86897..87190
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WH66_BIFBI
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_74
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87351..88976)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=8 Tax=Bifidobacterium RepID=E3EPV6_BIFBS
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_43_75
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89276..89479)
DNA (204bp) protein (68aa)
Cold shock protein n=7 Tax=Bifidobacterium RepID=E3EPV5_BIFBS
cspA; putative cold shock protein
Putative cold shock-like protein CspG {ECO:0000313|EMBL:EFR50019.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_43_76
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89635..90381)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GEF4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22765.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_77
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90462..91253
DNA (792bp) protein (264aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Uracil-DNA glycosylase n=3 Tax=Bifidobacterium RepID=E3EPV3_BIFBS
ung; uracil-DNA glycosylase
L1_008_000M1_scaffold_43_78
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91291..92370
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GBD9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22763.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
moxR; methanol dehydrogenase regulator
L1_008_000M1_scaffold_43_79
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92367..93347
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0X2_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22762.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_43_80
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93344..93916
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0X1_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83117.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_43_81
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93916..94989
DNA (1074bp) protein (358aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium bifidum RepID=U2DTM2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97840.1}; von Willebrand factor type A domain protein {ECO:0000313|EMBL:ERI83116.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_43_82
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94986..96014
DNA (1029bp) protein (343aa)
von Willebrand factor, type A n=7 Tax=Bifidobacterium RepID=I3WH57_BIFBI
von Willebrand factor, type A
von Willebrand factor, type A {ECO:0000313|EMBL:AFL04220.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_43_83
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96011..96646
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPU7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52869.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_43_84
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97239..97553
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8R8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR50010.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_43_85
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97550..99085
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0W6_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83110.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_43_86
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99245..100681
DNA (1437bp) protein (479aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:EKE50873.1}; EC=4.3.2.2 {ECO:0000313|EMBL:EKE50873.1};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
PurB Adenylosuccinate lyase n=4 Tax=Bifidobacterium bifidum RepID=E4P0W5_BIFBP
L1_008_000M1_scaffold_43_87
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100734..103238
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7I6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50874.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L1_008_000M1_scaffold_43_88
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103369..103650
DNA (282bp) protein (94aa)
DNA-binding protein HU n=8 Tax=Bifidobacterium RepID=E3ENY9_BIFBS
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:BAQ97834.1}; DNA-binding protein HB1 {ECO:0000313|EMBL:ERI83107.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_43_89
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103821..105281)
DNA (1461bp) protein (487aa)
Proteasome accessory factor PafA {ECO:0000313|EMBL:EFR50005.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFR50005.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Proteasome accessory factor PafA n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8R3_BIFBI
hypothetical protein
L1_008_000M1_scaffold_43_90
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105278..105481)
DNA (204bp) protein (68aa)
Ubiquitin-like protein Pup n=3 Tax=Bifidobacterium bifidum RepID=E4V8R2_BIFBI
hypothetical protein
Ubiquitin-like protein Pup {ECO:0000313|EMBL:ERI83105.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97832.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying items 61-90 of 164 in total

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