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NECEvent2014_3_4_Clostridium_butyricum_28_15

NECEvent2014_3_4_Clostridium_29_16
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 209 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_652 173_002_scaffold_652
Genus: Clostridium (100%)
5 6678 bp 30.37 16.82 90.03
NECEvent2014_3_4_scaffold_534 173_002_scaffold_534
Species: Clostridium butyricum (60%)
5 9183 bp 29.90 16.82 79.75
NECEvent2014_3_4_scaffold_554 173_002_scaffold_554
Species: Clostridium butyricum (71.43%)
7 8755 bp 28.17 16.82 83.40
NECEvent2014_3_4_scaffold_438 173_002_scaffold_438
Species: Clostridium butyricum (60%)
15 13170 bp 30.08 16.79 89.77
NECEvent2014_3_4_scaffold_401 173_002_scaffold_401
Species: Clostridium butyricum (53.33%)
15 16254 bp 28.68 16.76 88.45
NECEvent2014_3_4_scaffold_357 173_002_scaffold_357
Genus: Clostridium (100%)
17 21354 bp 28.03 16.65 80.94
NECEvent2014_3_4_scaffold_102 173_002_scaffold_102
Genus: Clostridium (98.67%)
75 80277 bp 29.84 16.64 88.68
NECEvent2014_3_4_scaffold_142 173_002_scaffold_142
Species: Clostridium butyricum (51.61%)
62 62662 bp 29.52 16.61 87.60
NECEvent2014_3_4_scaffold_862 173_002_scaffold_862
Species: Clostridium butyricum (100%)
4 4605 bp 30.08 16.61 89.97
NECEvent2014_3_4_scaffold_461 173_002_scaffold_461
Species: Clostridium butyricum (50%)
14 11807 bp 29.76 16.57 90.15
NECEvent2014_3_4_scaffold_255 173_002_scaffold_255
Species: Clostridium butyricum (55.17%)
29 35930 bp 28.58 16.56 86.41
NECEvent2014_3_4_scaffold_182 173_002_scaffold_182
Species: Clostridium butyricum (50%)
44 50848 bp 27.85 16.51 88.64
NECEvent2014_3_4_scaffold_321 173_002_scaffold_321
Species: Clostridium butyricum (50%)
20 25505 bp 27.73 16.48 82.33
NECEvent2014_3_4_scaffold_717 173_002_scaffold_717
Genus: Clostridium (60%)
5 5658 bp 29.36 16.41 74.28
NECEvent2014_3_4_scaffold_342 173_002_scaffold_342
Species: Clostridium butyricum (68.75%)
16 23089 bp 28.73 16.40 89.98
NECEvent2014_3_4_scaffold_278 173_002_scaffold_278
Species: Clostridium butyricum (53.85%)
26 32381 bp 28.62 16.35 85.36
NECEvent2014_3_4_scaffold_324 173_002_scaffold_324
Genus: Clostridium (82.76%)
29 25313 bp 27.51 16.31 76.57
NECEvent2014_3_4_scaffold_1478 173_002_scaffold_1478
Genus: Clostridium (100%)
3 2466 bp 30.74 16.30 83.70
NECEvent2014_3_4_scaffold_465 173_002_scaffold_465
Species: Clostridium sp. IBUN125C (50%)
10 11595 bp 30.17 16.29 80.21
NECEvent2014_3_4_scaffold_274 173_002_scaffold_274
Genus: Clostridium (96.67%)
30 33160 bp 29.10 16.29 85.10
NECEvent2014_3_4_scaffold_256 173_002_scaffold_256
Species: Clostridium butyricum (53.85%)
26 35765 bp 28.36 16.23 80.24
NECEvent2014_3_4_scaffold_333 173_002_scaffold_333
Species: Clostridium sp. IBUN125C (50%)
20 23707 bp 28.31 16.20 85.19
NECEvent2014_3_4_scaffold_779 173_002_scaffold_779
Species: Clostridium butyricum (50%)
6 5106 bp 27.16 16.16 94.30
NECEvent2014_3_4_scaffold_80 173_002_scaffold_80
Species: Clostridium butyricum (51.58%)
95 98957 bp 29.12 16.15 87.63
NECEvent2014_3_4_scaffold_777 173_002_scaffold_777
Species: Clostridium butyricum (60%)
5 5122 bp 29.95 16.14 89.20
NECEvent2014_3_4_scaffold_383 173_002_scaffold_383
Species: Clostridium butyricum (52.63%)
19 18071 bp 28.90 16.10 84.33
NECEvent2014_3_4_scaffold_263 173_002_scaffold_263
Species: Clostridium butyricum (70.97%)
31 34612 bp 28.31 16.08 87.39
NECEvent2014_3_4_scaffold_327 173_002_scaffold_327
Genus: Clostridium (100%)
21 24527 bp 28.08 16.08 91.43
NECEvent2014_3_4_scaffold_323 173_002_scaffold_323
Genus: Clostridium (100%)
25 25341 bp 29.68 16.06 90.40
NECEvent2014_3_4_scaffold_234 173_002_scaffold_234
Species: Clostridium butyricum (56.41%)
39 40206 bp 28.66 16.03 87.82
NECEvent2014_3_4_scaffold_360 173_002_scaffold_360
Genus: Clostridium (100%)
24 20899 bp 28.79 15.97 83.75
NECEvent2014_3_4_scaffold_441 173_002_scaffold_441
Species: Clostridium sp. IBUN125C (75%)
12 12885 bp 29.73 15.97 84.03
NECEvent2014_3_4_scaffold_608 173_002_scaffold_608
Species: Clostridium butyricum (62.5%)
8 7466 bp 26.90 15.95 90.17
NECEvent2014_3_4_scaffold_431 173_002_scaffold_431
Genus: Clostridium (92.31%)
13 13581 bp 28.79 15.94 80.74
NECEvent2014_3_4_scaffold_1400 173_002_scaffold_1400
Genus: Clostridium (80%)
5 2610 bp 26.17 15.92 69.12
NECEvent2014_3_4_scaffold_216 173_002_scaffold_216
Species: Clostridium butyricum (60.47%)
43 43785 bp 28.50 15.91 88.63
NECEvent2014_3_4_scaffold_451 173_002_scaffold_451
Genus: Clostridium (100%)
11 12453 bp 27.93 15.88 89.93
NECEvent2014_3_4_scaffold_482 173_002_scaffold_482
Species: Clostridium butyricum (60%)
10 10774 bp 28.26 15.84 80.89
NECEvent2014_3_4_scaffold_353 173_002_scaffold_353
Genus: Clostridium (100%)
21 21650 bp 28.76 15.84 87.37
NECEvent2014_3_4_scaffold_212 173_002_scaffold_212
Genus: Clostridium (100%)
37 44574 bp 28.56 15.82 85.59
NECEvent2014_3_4_scaffold_153 173_002_scaffold_153
Genus: Clostridium (96.15%)
52 59554 bp 28.63 15.79 84.47
NECEvent2014_3_4_scaffold_308 173_002_scaffold_308
Genus: Clostridium (100%)
19 27337 bp 28.20 15.78 88.61
NECEvent2014_3_4_scaffold_472 173_002_scaffold_472
Species: Clostridium butyricum (50%)
4 11222 bp 29.41 15.77 90.41
NECEvent2014_3_4_scaffold_823 173_002_scaffold_823
Species: Clostridium butyricum (75%)
4 4858 bp 28.86 15.75 77.69
NECEvent2014_3_4_scaffold_215 173_002_scaffold_215
Genus: Clostridium (100%)
39 43949 bp 28.60 15.74 87.56
NECEvent2014_3_4_scaffold_143 173_002_scaffold_143
Species: Clostridium butyricum (57.35%)
68 62574 bp 28.71 15.73 91.15
NECEvent2014_3_4_scaffold_683 173_002_scaffold_683
Genus: Clostridium (100%)
7 6175 bp 26.48 15.72 87.69
NECEvent2014_3_4_scaffold_444 173_002_scaffold_444
Species: Clostridium butyricum (54.55%)
11 12690 bp 28.09 15.65 83.92
NECEvent2014_3_4_scaffold_144 173_002_scaffold_144
Species: Clostridium butyricum (50%)
54 62516 bp 29.29 15.60 88.13
NECEvent2014_3_4_scaffold_423 173_002_scaffold_423
Species: Clostridium butyricum (63.64%)
11 14310 bp 28.39 15.57 86.52
Displaying items 51-100 of 209 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.