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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 501-550 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_4445 178_001_scaffold_4445
Species: Clostridium perfringens (100%)
1 1041 bp 30.16 9.22 81.84
NECEvent2014_8_1_scaffold_2910 178_001_scaffold_2910
Species: Clostridium perfringens (100%)
1 1623 bp 29.76 12.57 81.70
NECEvent2014_8_1_scaffold_3422 178_001_scaffold_3422
Species: Clostridium perfringens (100%)
1 1367 bp 29.85 7.46 99.85
NECEvent2014_8_1_scaffold_4446 178_001_scaffold_4446
Species: Clostridium saccharobutylicum (100%)
1 1041 bp 26.90 4.61 84.73
NECEvent2014_8_1_scaffold_3424 178_001_scaffold_3424
Species: Clostridium perfringens (100%)
1 1366 bp 30.01 6.81 99.93
NECEvent2014_8_1_scaffold_3680 178_001_scaffold_3680
Species: Clostridium perfringens (100%)
1 1266 bp 31.12 6.64 97.63
NECEvent2014_8_1_scaffold_3684 178_001_scaffold_3684
Species: Clostridium perfringens (100%)
1 1264 bp 27.61 5.93 98.26
NECEvent2014_8_1_scaffold_1893 178_001_scaffold_1893
Species: Clostridium perfringens (100%)
1 2513 bp 33.03 11.34 99.92
NECEvent2014_8_1_scaffold_4453 178_001_scaffold_4453
Species: Clostridium perfringens (100%)
1 1039 bp 31.67 13.86 99.62
NECEvent2014_8_1_scaffold_3174 178_001_scaffold_3174
Species: Clostridium perfringens (100%)
1 1473 bp 34.22 8.35 92.26
NECEvent2014_8_1_scaffold_3942 178_001_scaffold_3942
Species: Clostridium perfringens (100%)
1 1176 bp 29.08 5.10 86.48
NECEvent2014_8_1_scaffold_2919 178_001_scaffold_2919
Species: Clostridium perfringens (100%)
1 1620 bp 32.90 8.33 91.30
NECEvent2014_8_1_scaffold_3944 178_001_scaffold_3944
Species: Clostridium perfringens (100%)
1 1176 bp 34.52 8.16 100.00
NECEvent2014_8_1_scaffold_4457 178_001_scaffold_4457
Species: Clostridium perfringens (100%)
1 1039 bp 28.39 4.91 81.14
NECEvent2014_8_1_scaffold_3434 178_001_scaffold_3434
Species: Clostridium perfringens (100%)
1 1361 bp 31.08 6.83 94.56
NECEvent2014_8_1_scaffold_1899 178_001_scaffold_1899
Species: Clostridium perfringens (100%)
1 2508 bp 31.86 8.85 87.56
NECEvent2014_8_1_scaffold_3436 178_001_scaffold_3436
Species: Clostridium perfringens (100%)
1 1360 bp 27.87 6.84 78.31
NECEvent2014_8_1_scaffold_3692 178_001_scaffold_3692
Species: Clostridium perfringens (100%)
1 1261 bp 30.37 11.06 88.03
NECEvent2014_8_1_scaffold_3948 178_001_scaffold_3948
Species: Clostridium perfringens (100%)
1 1175 bp 31.83 10.21 99.83
NECEvent2014_8_1_scaffold_4205 178_001_scaffold_4205
Species: Clostridium perfringens (100%)
1 1104 bp 30.62 6.79 91.85
NECEvent2014_8_1_scaffold_2160 178_001_scaffold_2160
Species: Clostridium perfringens (100%)
1 2199 bp 31.15 11.46 99.86
NECEvent2014_8_1_scaffold_4471 178_001_scaffold_4471
Species: Clostridium perfringens (100%)
1 1035 bp 29.76 6.38 88.70
NECEvent2014_8_1_scaffold_2680 178_001_scaffold_2680
Species: Clostridium perfringens (100%)
1 1756 bp 29.84 7.86 73.80
NECEvent2014_8_1_scaffold_2936 178_001_scaffold_2936
Species: Clostridium perfringens (100%)
1 1608 bp 32.03 9.51 100.00
NECEvent2014_8_1_scaffold_3704 178_001_scaffold_3704
Species: Clostridium perfringens (100%)
1 1255 bp 31.87 11.00 80.80
NECEvent2014_8_1_scaffold_2938 178_001_scaffold_2938
Species: Clostridium perfringens (100%)
1 1606 bp 27.96 5.79 99.38
NECEvent2014_8_1_scaffold_4218 178_001_scaffold_4218
Species: Clostridium perfringens (100%)
1 1100 bp 30.82 9.00 93.82
NECEvent2014_8_1_scaffold_3709 178_001_scaffold_3709
Species: Clostridium perfringens (100%)
1 1253 bp 27.77 4.31 83.32
NECEvent2014_8_1_scaffold_2686 178_001_scaffold_2686
Species: Clostridium perfringens (100%)
1 1754 bp 32.67 15.22 91.68
NECEvent2014_8_1_scaffold_4222 178_001_scaffold_4222
Species: Clostridium perfringens (100%)
1 1099 bp 35.85 11.87 93.08
NECEvent2014_8_1_scaffold_4223 178_001_scaffold_4223
Species: Clostridium perfringens (100%)
1 1099 bp 25.93 3.28 99.91
NECEvent2014_8_1_scaffold_4479 178_001_scaffold_4479
Species: Clostridium perfringens (100%)
1 1032 bp 28.68 6.10 99.71
NECEvent2014_8_1_scaffold_2945 178_001_scaffold_2945
Species: Clostridium perfringens (100%)
1 1602 bp 31.71 10.30 94.76
NECEvent2014_8_1_scaffold_3969 178_001_scaffold_3969
Species: Clostridium perfringens (100%)
1 1168 bp 28.60 5.14 91.18
NECEvent2014_8_1_scaffold_4481 178_001_scaffold_4481
Species: Clostridium perfringens (100%)
1 1032 bp 30.52 5.52 86.05
NECEvent2014_8_1_scaffold_1666 178_001_scaffold_1666
Species: Clostridium perfringens (100%)
1 2854 bp 28.31 5.31 99.97
NECEvent2014_8_1_scaffold_3202 178_001_scaffold_3202
Species: Clostridium perfringens (100%)
1 1458 bp 31.21 7.00 69.55
NECEvent2014_8_1_scaffold_3459 178_001_scaffold_3459
Species: Clostridium perfringens (100%)
1 1353 bp 29.27 9.76 78.27
NECEvent2014_8_1_scaffold_3716 178_001_scaffold_3716
Species: Clostridium perfringens (100%)
1 1252 bp 31.07 6.23 83.87
NECEvent2014_8_1_scaffold_3717 178_001_scaffold_3717
Species: Clostridium perfringens (100%)
1 1252 bp 30.67 5.99 93.21
NECEvent2014_8_1_scaffold_3973 178_001_scaffold_3973
Species: Clostridium perfringens (100%)
1 1168 bp 32.36 6.42 99.66
NECEvent2014_8_1_scaffold_2950 178_001_scaffold_2950
Species: Clostridium perfringens (100%)
1 1599 bp 29.89 9.38 86.30
NECEvent2014_8_1_scaffold_3206 178_001_scaffold_3206
Species: Clostridium perfringens (100%)
1 1456 bp 29.81 5.36 99.73
NECEvent2014_8_1_scaffold_4230 178_001_scaffold_4230
Species: Clostridium perfringens (100%)
1 1098 bp 27.87 4.64 87.98
NECEvent2014_8_1_scaffold_3975 178_001_scaffold_3975
Species: Clostridium perfringens (100%)
1 1167 bp 32.82 5.40 99.74
NECEvent2014_8_1_scaffold_4231 178_001_scaffold_4231
Species: Clostridium perfringens (100%)
1 1097 bp 30.36 10.39 95.72
NECEvent2014_8_1_scaffold_4232 178_001_scaffold_4232
Species: Clostridium perfringens (100%)
1 1097 bp 30.54 4.92 99.82
NECEvent2014_8_1_scaffold_3977 178_001_scaffold_3977
Species: Clostridium perfringens (100%)
1 1166 bp 28.82 3.60 99.83
NECEvent2014_8_1_scaffold_4233 178_001_scaffold_4233
Species: Clostridium perfringens (100%)
1 1097 bp 31.27 12.03 86.96
NECEvent2014_8_1_scaffold_4489 178_001_scaffold_4489
Species: Clostridium perfringens (100%)
1 1030 bp 32.52 15.15 95.53
Displaying items 501-550 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.