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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 701-731 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_3584 178_001_scaffold_3584
Species: Clostridium perfringens (100%)
1 1299 bp 32.87 23.79 96.77
NECEvent2014_8_1_scaffold_2561 178_001_scaffold_2561
Species: Clostridium perfringens (100%)
1 1839 bp 29.80 9.46 77.81
NECEvent2014_8_1_scaffold_3073 178_001_scaffold_3073
Species: Clostridium perfringens (100%)
1 1524 bp 31.96 15.94 99.41
NECEvent2014_8_1_scaffold_2818 178_001_scaffold_2818
Species: Clostridium perfringens (100%)
1 1674 bp 32.62 6.81 100.00
NECEvent2014_8_1_scaffold_3330 178_001_scaffold_3330
Species: Clostridium perfringens (100%)
1 1405 bp 31.60 10.46 99.29
NECEvent2014_8_1_scaffold_4098 178_001_scaffold_4098
Species: Clostridium perfringens (100%)
1 1135 bp 32.25 7.14 99.91
NECEvent2014_8_1_scaffold_2307 178_001_scaffold_2307
Species: Clostridium perfringens (100%)
1 2038 bp 31.84 9.49 99.80
NECEvent2014_8_1_scaffold_2563 178_001_scaffold_2563
Species: Clostridium perfringens (100%)
1 1839 bp 26.37 6.53 92.66
NECEvent2014_8_1_scaffold_3078 178_001_scaffold_3078
Species: Clostridium perfringens (100%)
1 1523 bp 31.85 12.71 99.87
NECEvent2014_8_1_scaffold_3846 178_001_scaffold_3846
Species: Clostridium perfringens (100%)
1 1208 bp 28.15 4.97 99.83
NECEvent2014_8_1_scaffold_3336 178_001_scaffold_3336
Species: Clostridium perfringens (100%)
1 1403 bp 29.08 4.92 99.86
NECEvent2014_8_1_scaffold_4360 178_001_scaffold_4360
Species: Clostridium perfringens (100%)
1 1064 bp 32.99 6.77 99.81
NECEvent2014_8_1_scaffold_2313 178_001_scaffold_2313
Species: Clostridium perfringens (100%)
1 2033 bp 32.86 12.10 99.90
NECEvent2014_8_1_scaffold_3337 178_001_scaffold_3337
Species: Clostridium perfringens (100%)
1 1403 bp 31.29 9.19 99.86
NECEvent2014_8_1_scaffold_3849 178_001_scaffold_3849
Species: Clostridium perfringens (100%)
1 1206 bp 29.10 6.47 100.00
NECEvent2014_8_1_scaffold_4361 178_001_scaffold_4361
Species: Clostridium perfringens (100%)
1 1064 bp 30.64 8.18 99.81
NECEvent2014_8_1_scaffold_1802 178_001_scaffold_1802
Species: Clostridium perfringens (100%)
1 2642 bp 30.43 11.13 85.96
NECEvent2014_8_1_scaffold_2314 178_001_scaffold_2314
Species: Clostridium perfringens (100%)
1 2032 bp 27.46 8.93 72.64
NECEvent2014_8_1_scaffold_3850 178_001_scaffold_3850
Species: Clostridium perfringens (100%)
1 1205 bp 31.78 8.34 97.59
NECEvent2014_8_1_scaffold_2827 178_001_scaffold_2827
Species: Clostridium perfringens (100%)
1 1668 bp 33.87 11.87 91.37
NECEvent2014_8_1_scaffold_3083 178_001_scaffold_3083
Species: Clostridium perfringens (100%)
1 1519 bp 31.73 6.71 99.93
NECEvent2014_8_1_scaffold_4363 178_001_scaffold_4363
Species: Clostridium perfringens (100%)
1 1063 bp 31.89 8.75 80.72
NECEvent2014_8_1_scaffold_3853 178_001_scaffold_3853
Species: Clostridium perfringens (100%)
1 1204 bp 28.82 3.49 92.94
NECEvent2014_8_1_scaffold_4110 178_001_scaffold_4110
Species: Clostridium perfringens (100%)
1 1130 bp 30.97 5.58 99.82
NECEvent2014_8_1_scaffold_3600 178_001_scaffold_3600
Species: Clostridium perfringens (100%)
1 1292 bp 25.62 4.88 83.82
NECEvent2014_8_1_scaffold_2321 178_001_scaffold_2321
Species: Clostridium perfringens (100%)
1 2025 bp 31.90 7.41 99.85
NECEvent2014_8_1_scaffold_3601 178_001_scaffold_3601
Species: Clostridium perfringens (100%)
1 1292 bp 30.19 9.98 99.85
NECEvent2014_8_1_scaffold_3858 178_001_scaffold_3858
Species: Clostridium perfringens (100%)
1 1204 bp 29.15 7.48 99.92
NECEvent2014_8_1_scaffold_4370 178_001_scaffold_4370
Species: Clostridium perfringens (100%)
1 1061 bp 32.23 5.37 99.81
NECEvent2014_8_1_scaffold_3091 178_001_scaffold_3091
Species: Clostridium perfringens (100%)
1 1517 bp 30.13 5.74 99.87
NECEvent2014_8_1_scaffold_4115 178_001_scaffold_4115
Species: Clostridium perfringens (100%)
1 1128 bp 28.37 5.05 91.22
Displaying items 701-731 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.