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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 651-700 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_3296 178_001_scaffold_3296
Species: Clostridium perfringens (100%)
1 1421 bp 30.61 6.97 99.86
NECEvent2014_8_1_scaffold_4320 178_001_scaffold_4320
Species: Clostridium perfringens (100%)
1 1073 bp 32.25 6.71 95.62
NECEvent2014_8_1_scaffold_2531 178_001_scaffold_2531
Species: Clostridium perfringens (100%)
1 1857 bp 27.14 5.98 77.38
NECEvent2014_8_1_scaffold_4067 178_001_scaffold_4067
Species: Clostridium perfringens (100%)
1 1142 bp 30.91 6.30 86.16
NECEvent2014_8_1_scaffold_2788 178_001_scaffold_2788
Species: Clostridium perfringens (100%)
1 1695 bp 30.68 6.37 93.63
NECEvent2014_8_1_scaffold_4068 178_001_scaffold_4068
Species: Clostridium perfringens (100%)
1 1142 bp 29.77 8.41 99.82
NECEvent2014_8_1_scaffold_2277 178_001_scaffold_2277
Species: Clostridium perfringens (100%)
1 2069 bp 29.10 6.52 99.90
NECEvent2014_8_1_scaffold_4325 178_001_scaffold_4325
Species: Clostridium perfringens (100%)
1 1072 bp 30.50 6.72 99.07
NECEvent2014_8_1_scaffold_3302 178_001_scaffold_3302
Species: Clostridium perfringens (100%)
1 1419 bp 31.08 10.15 77.80
NECEvent2014_8_1_scaffold_4327 178_001_scaffold_4327
Species: Clostridium perfringens (100%)
1 1072 bp 35.91 8.96 99.91
NECEvent2014_8_1_scaffold_2536 178_001_scaffold_2536
Species: Clostridium perfringens (100%)
1 1851 bp 30.96 10.86 90.44
NECEvent2014_8_1_scaffold_3817 178_001_scaffold_3817
Species: Clostridium perfringens (100%)
1 1216 bp 35.94 11.60 98.44
NECEvent2014_8_1_scaffold_4073 178_001_scaffold_4073
Species: Clostridium perfringens (100%)
1 1142 bp 27.85 4.20 99.82
NECEvent2014_8_1_scaffold_4331 178_001_scaffold_4331
Species: Clostridium perfringens (100%)
1 1071 bp 29.88 4.48 99.72
NECEvent2014_8_1_scaffold_4587 178_001_scaffold_4587
Species: Clostridium perfringens (100%)
1 1006 bp 25.15 8.05 73.06
NECEvent2014_8_1_scaffold_3052 178_001_scaffold_3052
Species: Clostridium perfringens (100%)
1 1533 bp 29.48 5.09 98.24
NECEvent2014_8_1_scaffold_3564 178_001_scaffold_3564
Species: Clostridium perfringens (100%)
1 1308 bp 31.57 18.35 93.12
NECEvent2014_8_1_scaffold_4332 178_001_scaffold_4332
Species: Clostridium perfringens (100%)
1 1071 bp 30.81 5.88 99.72
NECEvent2014_8_1_scaffold_4588 178_001_scaffold_4588
Species: Clostridium perfringens (100%)
1 1005 bp 28.26 3.58 85.07
NECEvent2014_8_1_scaffold_2285 178_001_scaffold_2285
Species: Clostridium perfringens (100%)
1 2062 bp 31.86 9.60 87.00
NECEvent2014_8_1_scaffold_2286 178_001_scaffold_2286
Species: Clostridium perfringens (100%)
1 2061 bp 33.62 17.76 98.69
NECEvent2014_8_1_scaffold_3054 178_001_scaffold_3054
Species: Clostridium perfringens (100%)
1 1532 bp 31.20 9.01 90.08
NECEvent2014_8_1_scaffold_4078 178_001_scaffold_4078
Species: Clostridium perfringens (100%)
1 1141 bp 30.50 6.44 99.91
NECEvent2014_8_1_scaffold_3055 178_001_scaffold_3055
Species: Clostridium perfringens (100%)
1 1532 bp 30.35 11.16 93.99
NECEvent2014_8_1_scaffold_4591 178_001_scaffold_4591
Species: Clostridium perfringens (100%)
1 1005 bp 31.14 5.67 99.70
NECEvent2014_8_1_scaffold_1264 178_001_scaffold_1264
Species: Clostridium perfringens (100%)
1 3793 bp 32.27 7.20 99.89
NECEvent2014_8_1_scaffold_1776 178_001_scaffold_1776
Species: Clostridium perfringens (100%)
1 2677 bp 32.46 11.21 97.50
NECEvent2014_8_1_scaffold_2800 178_001_scaffold_2800
Species: Clostridium perfringens (100%)
1 1687 bp 31.00 5.16 99.76
NECEvent2014_8_1_scaffold_3824 178_001_scaffold_3824
Species: Clostridium perfringens (100%)
1 1213 bp 35.45 23.00 98.43
NECEvent2014_8_1_scaffold_3572 178_001_scaffold_3572
Species: Clostridium butyricum (100%)
1 1303 bp 28.24 4.14 99.92
NECEvent2014_8_1_scaffold_3061 178_001_scaffold_3061
Species: Clostridium perfringens (100%)
1 1528 bp 30.10 8.25 93.85
NECEvent2014_8_1_scaffold_4597 178_001_scaffold_4597
Species: Clostridium perfringens (100%)
1 1004 bp 27.89 3.29 92.93
NECEvent2014_8_1_scaffold_2294 178_001_scaffold_2294
Species: Clostridium perfringens (100%)
1 2053 bp 34.44 13.88 98.64
NECEvent2014_8_1_scaffold_2551 178_001_scaffold_2551
Species: Clostridium perfringens (100%)
1 1845 bp 31.71 11.54 99.84
NECEvent2014_8_1_scaffold_3831 178_001_scaffold_3831
Species: Clostridium botulinum (100%)
1 1212 bp 29.46 4.70 99.75
NECEvent2014_8_1_scaffold_4344 178_001_scaffold_4344
Species: Clostridium perfringens (100%)
1 1068 bp 30.43 6.46 91.57
NECEvent2014_8_1_scaffold_3321 178_001_scaffold_3321
Species: Clostridium perfringens (100%)
1 1408 bp 31.25 14.06 99.93
NECEvent2014_8_1_scaffold_4089 178_001_scaffold_4089
Species: Clostridium perfringens (100%)
1 1137 bp 29.99 4.88 80.47
NECEvent2014_8_1_scaffold_4345 178_001_scaffold_4345
Species: Clostridium perfringens (100%)
1 1068 bp 26.69 5.90 61.52
NECEvent2014_8_1_scaffold_2555 178_001_scaffold_2555
Species: Clostridium perfringens (100%)
1 1841 bp 29.06 5.54 99.89
NECEvent2014_8_1_scaffold_2811 178_001_scaffold_2811
Species: Clostridium perfringens (100%)
1 1681 bp 31.05 5.71 97.80
NECEvent2014_8_1_scaffold_3323 178_001_scaffold_3323
Species: Clostridium perfringens (100%)
1 1407 bp 28.22 10.02 88.70
NECEvent2014_8_1_scaffold_3579 178_001_scaffold_3579
Species: Clostridium perfringens (100%)
1 1301 bp 31.67 9.45 93.16
NECEvent2014_8_1_scaffold_3836 178_001_scaffold_3836
Species: Clostridium perfringens (100%)
1 1211 bp 28.90 11.89 82.99
NECEvent2014_8_1_scaffold_4604 178_001_scaffold_4604
Species: Clostridium perfringens (100%)
1 1002 bp 29.64 8.38 90.72
NECEvent2014_8_1_scaffold_3837 178_001_scaffold_3837
Species: Clostridium perfringens (100%)
1 1210 bp 31.90 7.31 98.18
NECEvent2014_8_1_scaffold_4605 178_001_scaffold_4605
Species: Clostridium perfringens (100%)
1 1001 bp 29.57 6.89 81.82
NECEvent2014_8_1_scaffold_2814 178_001_scaffold_2814
Species: Clostridium perfringens (100%)
1 1679 bp 30.67 5.18 95.41
NECEvent2014_8_1_scaffold_3070 178_001_scaffold_3070
Species: Clostridium perfringens (100%)
1 1525 bp 29.05 6.49 99.74
NECEvent2014_8_1_scaffold_3326 178_001_scaffold_3326
Species: Clostridium perfringens (100%)
1 1406 bp 32.50 9.39 95.59
Displaying items 651-700 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.