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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 601-650 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2235 178_001_scaffold_2235
Species: Clostridium perfringens (100%)
1 2114 bp 32.73 10.08 99.91
NECEvent2014_8_1_scaffold_3003 178_001_scaffold_3003
Species: Clostridium perfringens (100%)
1 1564 bp 32.23 16.88 89.96
NECEvent2014_8_1_scaffold_2494 178_001_scaffold_2494
Species: Clostridium perfringens (100%)
1 1891 bp 27.60 9.84 72.82
NECEvent2014_8_1_scaffold_3006 178_001_scaffold_3006
Species: Clostridium perfringens (100%)
1 1561 bp 30.75 6.53 99.94
NECEvent2014_8_1_scaffold_3518 178_001_scaffold_3518
Species: Clostridium perfringens (100%)
1 1326 bp 33.03 7.01 92.31
NECEvent2014_8_1_scaffold_1473 178_001_scaffold_1473
Species: Clostridium perfringens (100%)
1 3251 bp 32.21 9.37 99.94
NECEvent2014_8_1_scaffold_4033 178_001_scaffold_4033
Species: Clostridium perfringens (100%)
1 1151 bp 31.54 10.30 94.09
NECEvent2014_8_1_scaffold_2754 178_001_scaffold_2754
Species: Clostridium perfringens (100%)
1 1714 bp 30.98 13.13 77.89
NECEvent2014_8_1_scaffold_3522 178_001_scaffold_3522
Species: Clostridium perfringens (100%)
1 1324 bp 31.34 7.25 93.81
NECEvent2014_8_1_scaffold_3011 178_001_scaffold_3011
Species: Clostridium perfringens (100%)
1 1559 bp 30.92 6.74 93.33
NECEvent2014_8_1_scaffold_4291 178_001_scaffold_4291
Species: Clostridium perfringens (100%)
1 1081 bp 33.02 11.93 71.32
NECEvent2014_8_1_scaffold_1476 178_001_scaffold_1476
Species: Clostridium perfringens (100%)
1 3247 bp 33.42 13.21 99.14
NECEvent2014_8_1_scaffold_3780 178_001_scaffold_3780
Species: Clostridium perfringens (100%)
1 1228 bp 29.56 7.08 97.23
NECEvent2014_8_1_scaffold_4293 178_001_scaffold_4293
Species: Clostridium perfringens (100%)
1 1080 bp 29.35 6.11 93.61
NECEvent2014_8_1_scaffold_3270 178_001_scaffold_3270
Species: Clostridium perfringens (100%)
1 1432 bp 31.08 5.24 99.93
NECEvent2014_8_1_scaffold_3526 178_001_scaffold_3526
Species: Clostridium perfringens (100%)
1 1322 bp 33.06 8.28 86.91
NECEvent2014_8_1_scaffold_4550 178_001_scaffold_4550
Species: Clostridium perfringens (100%)
1 1016 bp 29.63 7.38 91.83
NECEvent2014_8_1_scaffold_2759 178_001_scaffold_2759
Species: Clostridium perfringens (100%)
1 1712 bp 32.94 13.49 79.73
NECEvent2014_8_1_scaffold_3784 178_001_scaffold_3784
Species: Clostridium perfringens (100%)
1 1227 bp 28.44 8.07 81.66
NECEvent2014_8_1_scaffold_3273 178_001_scaffold_3273
Species: Clostridium perfringens (100%)
1 1431 bp 31.66 14.47 83.65
NECEvent2014_8_1_scaffold_3786 178_001_scaffold_3786
Species: Clostridium perfringens (100%)
1 1227 bp 29.67 5.87 93.40
NECEvent2014_8_1_scaffold_4555 178_001_scaffold_4555
Species: Clostridium perfringens (100%)
1 1015 bp 35.17 8.28 99.61
NECEvent2014_8_1_scaffold_2252 178_001_scaffold_2252
Species: Clostridium perfringens (100%)
1 2096 bp 29.34 6.15 99.90
NECEvent2014_8_1_scaffold_2764 178_001_scaffold_2764
Species: Clostridium perfringens (100%)
1 1709 bp 30.84 8.95 72.50
NECEvent2014_8_1_scaffold_3533 178_001_scaffold_3533
Species: Clostridium perfringens (100%)
1 1320 bp 31.21 8.41 96.82
NECEvent2014_8_1_scaffold_3789 178_001_scaffold_3789
Species: Clostridium perfringens (100%)
1 1226 bp 32.54 10.77 63.38
NECEvent2014_8_1_scaffold_4045 178_001_scaffold_4045
Species: Clostridium perfringens (100%)
1 1149 bp 32.29 8.36 98.43
NECEvent2014_8_1_scaffold_3790 178_001_scaffold_3790
Species: Clostridium perfringens (100%)
1 1226 bp 31.00 7.10 95.43
NECEvent2014_8_1_scaffold_4046 178_001_scaffold_4046
Species: Clostridium perfringens (100%)
1 1148 bp 31.45 8.49 95.12
NECEvent2014_8_1_scaffold_2511 178_001_scaffold_2511
Species: Clostridium perfringens (100%)
1 1876 bp 30.12 7.36 99.79
NECEvent2014_8_1_scaffold_2256 178_001_scaffold_2256
Species: Clostridium perfringens (100%)
1 2091 bp 30.75 8.32 100.00
NECEvent2014_8_1_scaffold_2515 178_001_scaffold_2515
Species: Clostridium perfringens (100%)
1 1874 bp 30.10 9.45 99.89
NECEvent2014_8_1_scaffold_3796 178_001_scaffold_3796
Species: Clostridium perfringens (100%)
1 1224 bp 27.12 5.39 98.28
NECEvent2014_8_1_scaffold_4308 178_001_scaffold_4308
Species: Clostridium perfringens (100%)
1 1076 bp 29.74 9.48 99.81
NECEvent2014_8_1_scaffold_4053 178_001_scaffold_4053
Species: Clostridium perfringens (100%)
1 1145 bp 28.91 5.76 94.32
NECEvent2014_8_1_scaffold_3031 178_001_scaffold_3031
Species: Clostridium perfringens (100%)
1 1544 bp 28.63 10.49 96.96
NECEvent2014_8_1_scaffold_2520 178_001_scaffold_2520
Species: Clostridium perfringens (100%)
1 1868 bp 31.32 6.99 99.89
NECEvent2014_8_1_scaffold_3289 178_001_scaffold_3289
Species: Clostridium perfringens (100%)
1 1424 bp 28.79 6.32 82.37
NECEvent2014_8_1_scaffold_3545 178_001_scaffold_3545
Species: Clostridium perfringens (100%)
1 1315 bp 30.27 5.48 91.25
NECEvent2014_8_1_scaffold_4057 178_001_scaffold_4057
Species: Clostridium perfringens (100%)
1 1145 bp 28.65 6.03 99.30
NECEvent2014_8_1_scaffold_3291 178_001_scaffold_3291
Species: Clostridium perfringens (100%)
1 1422 bp 32.14 9.28 97.89
NECEvent2014_8_1_scaffold_4315 178_001_scaffold_4315
Species: Clostridium perfringens (100%)
1 1074 bp 30.07 5.87 98.88
NECEvent2014_8_1_scaffold_4571 178_001_scaffold_4571
Species: Clostridium perfringens (100%)
1 1010 bp 28.32 4.16 89.70
NECEvent2014_8_1_scaffold_3804 178_001_scaffold_3804
Species: Clostridium perfringens (100%)
1 1222 bp 29.95 7.36 95.74
NECEvent2014_8_1_scaffold_2781 178_001_scaffold_2781
Species: Clostridium perfringens (100%)
1 1699 bp 30.14 6.18 99.76
NECEvent2014_8_1_scaffold_3038 178_001_scaffold_3038
Species: Clostridium perfringens (100%)
1 1542 bp 32.68 11.77 90.27
NECEvent2014_8_1_scaffold_4062 178_001_scaffold_4062
Species: Clostridium perfringens (100%)
1 1144 bp 30.77 6.56 97.55
NECEvent2014_8_1_scaffold_4318 178_001_scaffold_4318
Species: Clostridium perfringens (100%)
1 1073 bp 30.20 6.99 99.81
NECEvent2014_8_1_scaffold_4063 178_001_scaffold_4063
Species: Clostridium perfringens (100%)
1 1143 bp 33.33 9.19 99.74
NECEvent2014_8_1_scaffold_1504 178_001_scaffold_1504
Species: Clostridium perfringens (100%)
1 3165 bp 32.10 10.62 94.98
Displaying items 601-650 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.