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PLM6_170_b1_sep16_Chloroflexi_61_13

PLM3-1_170cm_b1_sep2016_Chloroflexi_61_13
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 101-150 of 331 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_18755
Phylum: Chloroflexi (71.43%)
7 5410 bp 60.22 12.75 89.11
PLM3-1_170_b1_sep16_scaffold_11694
Species: RBG_16_Chloroflexi_63_12_curated (50%)
4 4233 bp 61.12 12.76 96.46
PLM3-1_170_b1_sep16_scaffold_8056
Phylum: Chloroflexi (100%)
7 5199 bp 61.84 12.78 88.75
PLM3-1_170_b1_sep16_scaffold_408
Phylum: Chloroflexi (52.17%)
23 31435 bp 59.61 12.79 88.46
PLM3-1_170_b1_sep16_scaffold_588
Phylum: Chloroflexi (53.13%)
32 24731 bp 59.41 12.80 84.43
PLM3-1_170_b1_sep16_scaffold_3991
Domain: Bacteria (78.95%)
19 21230 bp 60.63 12.83 83.67
PLM3-1_170_b1_sep16_scaffold_891
Phylum: Chloroflexi (72.22%)
18 20727 bp 59.97 12.84 88.22
PLM3-1_170_b1_sep16_scaffold_4898
Phylum: Chloroflexi (100%)
5 6711 bp 61.75 12.85 91.64
PLM3-1_170_b1_sep16_scaffold_10082
Domain: Bacteria (88.89%)
9 8520 bp 62.71 12.85 89.79
PLM3-1_170_b1_sep16_scaffold_11039
Species: RBG_16_Chloroflexi_63_12_curated (50%)
14 8497 bp 61.53 12.87 86.78
PLM3-1_170_b1_sep16_scaffold_13464
Phylum: Chloroflexi (100%)
5 3921 bp 62.92 12.89 89.14
PLM3-1_170_b1_sep16_scaffold_721
Phylum: Chloroflexi (54.55%)
22 18411 bp 59.89 12.90 82.17
PLM3-1_170_b1_sep16_scaffold_27441
Phylum: Chloroflexi (50%)
6 5480 bp 64.32 12.92 78.07
PLM3-1_170_b1_sep16_scaffold_662
Phylum: Chloroflexi (77.78%)
18 20231 bp 61.88 12.92 84.52
PLM3-1_170_b1_sep16_scaffold_3770
Phylum: Chloroflexi (100%)
9 7690 bp 62.31 12.93 88.01
PLM3-1_170_b1_sep16_scaffold_2383
Phylum: Chloroflexi (92.31%)
13 10520 bp 61.53 12.96 87.03
PLM3-1_170_b1_sep16_scaffold_7585
Domain: Bacteria (100%)
5 5363 bp 61.46 12.98 95.66
PLM3-1_170_b1_sep16_scaffold_5903
Phylum: Chloroflexi (100%)
3 6114 bp 63.53 13.00 98.38
PLM3-1_170_b1_sep16_scaffold_6566
Phylum: Chloroflexi (75%)
8 7574 bp 61.26 13.01 92.57
PLM3-1_170_b1_sep16_scaffold_1532
Phylum: Chloroflexi (87.5%)
8 12095 bp 62.94 13.01 89.47
PLM3-1_170_b1_sep16_scaffold_2085
Phylum: Chloroflexi (83.33%)
12 12530 bp 60.66 13.01 86.12
PLM3-1_170_b1_sep16_scaffold_30400
Phylum: Chloroflexi (80%)
5 3157 bp 62.05 13.02 98.54
PLM3-1_170_b1_sep16_scaffold_21182
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
4 3052 bp 62.81 13.02 93.48
PLM3-1_170_b1_sep16_scaffold_6200
Phylum: Chloroflexi (50%)
6 5955 bp 61.36 13.02 89.97
PLM3-1_170_b1_sep16_scaffold_101
Domain: Bacteria (92.86%)
28 34535 bp 59.79 13.03 85.79
PLM3-1_170_b1_sep16_scaffold_122
Phylum: Chloroflexi (72.22%)
54 48916 bp 60.17 13.04 88.08
PLM3-1_170_b1_sep16_scaffold_47237
Species: RBG_13_Chloroflexi_68_17_curated (75%)
4 3161 bp 63.02 13.05 88.55
PLM3-1_170_b1_sep16_scaffold_11158
Domain: Bacteria (80%)
10 8059 bp 59.93 13.05 82.53
PLM3-1_170_b1_sep16_scaffold_735
Domain: Bacteria (52.17%)
46 45366 bp 59.70 13.05 87.05
PLM3-1_170_b1_sep16_scaffold_990
Domain: Bacteria (81.25%)
16 14939 bp 62.96 13.07 93.22
PLM3-1_170_b1_sep16_scaffold_8200
Species: RBG_13_Chloroflexi_68_17_curated (54.55%)
11 10411 bp 60.34 13.10 90.77
PLM3-1_170_b1_sep16_scaffold_16739
Phylum: Chloroflexi (100%)
5 3992 bp 61.92 13.11 93.71
PLM3-1_170_b1_sep16_scaffold_19308
Domain: Bacteria (60%)
5 4015 bp 62.04 13.11 92.95
PLM3-1_170_b1_sep16_scaffold_556
Domain: Bacteria (88%)
25 22031 bp 62.57 13.11 89.74
PLM3-1_170_b1_sep16_scaffold_2814
Phylum: Chloroflexi (66.67%)
12 8916 bp 59.41 13.11 79.78
PLM3-1_170_b1_sep16_scaffold_3705
Phylum: Chloroflexi (88.89%)
9 7766 bp 61.41 13.11 92.63
PLM3-1_170_b1_sep16_scaffold_305
Phylum: Chloroflexi (60.53%)
38 37527 bp 60.88 13.12 90.27
PLM3-1_170_b1_sep16_scaffold_11474
Species: RBG_16_Chloroflexi_63_12_curated (62.5%)
8 7373 bp 61.06 13.12 87.81
PLM3-1_170_b1_sep16_scaffold_3205
Domain: Bacteria (77.27%)
22 17358 bp 56.58 13.15 83.70
PLM3-1_170_b1_sep16_scaffold_8143
Phylum: Chloroflexi (57.14%)
14 9140 bp 59.87 13.16 88.62
PLM3-1_170_b1_sep16_scaffold_5352
Phylum: Chloroflexi (80%)
5 6439 bp 60.79 13.16 81.63
PLM3-1_170_b1_sep16_scaffold_7682
Phylum: Chloroflexi (72.73%)
11 13841 bp 62.71 13.19 82.95
PLM3-1_170_b1_sep16_scaffold_17967
Phylum: Chloroflexi (88.89%)
9 8486 bp 60.29 13.26 94.36
PLM3-1_170_b1_sep16_scaffold_8055
Domain: Bacteria (77.78%)
18 15909 bp 59.77 13.27 87.48
PLM3-1_170_b1_sep16_scaffold_7780
Phylum: Chloroflexi (100%)
7 9554 bp 62.80 13.28 99.16
PLM3-1_170_b1_sep16_scaffold_3331
Phylum: Chloroflexi (61.9%)
21 20549 bp 58.42 13.30 78.69
PLM3-1_170_b1_sep16_scaffold_2745
Phylum: Chloroflexi (66.67%)
27 39473 bp 61.90 13.30 88.47
PLM3-1_170_b1_sep16_scaffold_10083
Phylum: Chloroflexi (52.63%)
19 14174 bp 59.08 13.30 88.34
PLM3-1_170_b1_sep16_scaffold_1622
Phylum: Chloroflexi (63.16%)
19 15873 bp 58.88 13.33 84.37
PLM3-1_170_b1_sep16_scaffold_2651
Phylum: Chloroflexi (52.63%)
19 22679 bp 61.65 13.33 94.34
Displaying items 101-150 of 331 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.