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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 51-100 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_524 33 32941 bp 56.38 20.85 81.30
qs_1_scaffold_767 33 28729 bp 54.25 21.69 62.66
qs_1_scaffold_305 33 37200 bp 55.97 21.40 87.17
qs_1_scaffold_1144 32 22275 bp 56.14 20.18 81.54
qs_1_scaffold_1009 32 32439 bp 54.94 20.71 68.86
qs_1_scaffold_168 32 31083 bp 55.31 21.07 80.63
qs_1_scaffold_321 32 36067 bp 55.16 21.65 77.38
qs_1_scaffold_1345 32 35939 bp 55.22 21.73 73.78
qs_1_scaffold_225 31 35322 bp 55.73 21.39 71.64
qs_1_scaffold_897 31 42980 bp 52.66 21.91 62.87
qs_1_scaffold_233 31 24369 bp 55.22 21.22 83.22
qs_1_scaffold_314 31 36361 bp 54.76 21.19 74.21
qs_1_scaffold_389 30 31977 bp 54.71 21.90 79.26
qs_1_scaffold_426
Domain: Viridiplantae (53.33%)
30 20682 bp 51.76 21.74 80.24
qs_1_scaffold_1120 30 30666 bp 56.25 21.27 77.73
qs_1_scaffold_554 30 24126 bp 56.82 21.90 78.11
qs_1_scaffold_150
Domain: Viridiplantae (63.33%)
30 29551 bp 55.98 21.03 79.54
qs_1_scaffold_1181 30 31752 bp 52.57 22.41 67.55
qs_1_scaffold_1160 30 18476 bp 56.22 19.85 82.49
qs_1_scaffold_514 29 36793 bp 54.24 21.80 75.37
qs_1_scaffold_1843 29 28694 bp 54.34 21.32 71.89
qs_1_scaffold_1729 29 25460 bp 57.36 21.59 79.95
qs_1_scaffold_307 29 23260 bp 54.24 21.18 79.71
qs_1_scaffold_291 29 26289 bp 55.11 21.06 77.22
qs_1_scaffold_241 28 24039 bp 56.92 20.64 82.03
qs_1_scaffold_172
Domain: Viridiplantae (50%)
28 29720 bp 55.19 21.82 74.98
qs_1_scaffold_711 28 29091 bp 54.50 20.88 74.98
qs_1_scaffold_487 28 26313 bp 56.59 21.07 78.13
qs_1_scaffold_667 28 27992 bp 54.55 21.81 74.31
qs_1_scaffold_99 28 39150 bp 54.14 22.25 74.10
qs_1_scaffold_492 28 18202 bp 56.55 21.85 74.65
qs_1_scaffold_673 28 24624 bp 54.83 20.70 68.91
qs_1_scaffold_1225 28 23610 bp 55.47 20.60 78.91
qs_1_scaffold_284 28 22601 bp 53.44 22.84 75.00
qs_1_scaffold_1116
Domain: Viridiplantae (50%)
28 24787 bp 56.11 20.74 78.22
qs_1_scaffold_979 27 21799 bp 55.07 20.41 81.09
qs_1_scaffold_211 27 29698 bp 55.22 21.72 78.32
qs_1_scaffold_170 27 36538 bp 55.26 21.24 85.34
qs_1_scaffold_120 27 32005 bp 57.58 20.94 78.85
qs_1_scaffold_399 27 21232 bp 54.86 22.11 75.52
qs_1_scaffold_266 27 23337 bp 55.26 21.72 75.74
qs_1_scaffold_156 26 29072 bp 55.26 21.03 73.98
qs_1_scaffold_870
Domain: Viridiplantae (50%)
26 35670 bp 53.34 20.93 66.59
qs_1_scaffold_709 26 23674 bp 55.66 20.11 80.59
qs_1_scaffold_710 26 33178 bp 56.12 21.38 74.53
qs_1_scaffold_827 26 18913 bp 54.48 20.79 80.15
qs_1_scaffold_318 26 26788 bp 54.56 20.94 76.59
qs_1_scaffold_579 26 26555 bp 53.90 20.35 73.95
qs_1_scaffold_1431 26 20740 bp 54.16 22.03 65.89
qs_1_scaffold_127 26 31036 bp 55.89 21.99 81.23
Displaying items 51-100 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.