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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 101-150 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_654 26 24882 bp 55.83 21.01 72.10
qs_1_scaffold_547 26 31283 bp 60.95 20.17 79.50
qs_1_scaffold_908 25 19494 bp 53.47 21.61 84.81
qs_1_scaffold_915 25 22475 bp 52.78 22.09 66.15
qs_1_scaffold_1710 25 16315 bp 53.70 18.03 69.40
qs_1_scaffold_1642 25 22580 bp 56.82 20.50 76.19
qs_1_scaffold_865 24 21615 bp 56.23 21.18 77.65
qs_1_scaffold_204
Phylum: Chlorophyta (50%)
24 26224 bp 61.26 19.83 87.23
qs_1_scaffold_553 24 29600 bp 56.20 20.43 71.75
qs_1_scaffold_428 24 26849 bp 55.40 20.90 81.81
qs_1_scaffold_580 24 27358 bp 52.98 20.93 63.24
qs_1_scaffold_1294 24 24040 bp 54.99 20.99 82.72
qs_1_scaffold_719 24 20997 bp 54.84 22.64 84.83
qs_1_scaffold_1318 24 16549 bp 55.28 21.91 72.22
qs_1_scaffold_675
Domain: Viridiplantae (50%)
24 27513 bp 56.20 21.16 84.15
qs_1_scaffold_357 24 20115 bp 55.70 21.09 70.83
qs_1_scaffold_729 23 20923 bp 53.76 21.34 64.91
qs_1_scaffold_1054 23 16243 bp 57.22 19.13 72.71
qs_1_scaffold_361 23 26333 bp 55.35 21.40 73.48
qs_1_scaffold_1104 23 17858 bp 53.57 20.67 78.37
qs_1_scaffold_1337 23 15352 bp 56.19 20.87 71.87
qs_1_scaffold_858 23 20920 bp 54.98 20.29 80.68
qs_1_scaffold_1664 23 17282 bp 54.43 20.32 69.38
qs_1_scaffold_971 23 20055 bp 55.55 21.53 73.16
qs_1_scaffold_1045 23 17601 bp 55.35 21.87 77.06
qs_1_scaffold_1415 23 16284 bp 51.96 22.84 71.55
qs_1_scaffold_796 22 23206 bp 56.11 21.57 74.83
qs_1_scaffold_1073 22 19131 bp 57.01 20.23 74.09
qs_1_scaffold_637 22 22811 bp 56.90 17.39 65.11
qs_1_scaffold_799 22 14306 bp 54.42 21.46 78.58
qs_1_scaffold_468 22 26939 bp 55.18 21.71 75.85
qs_1_scaffold_126 22 31155 bp 55.14 21.28 87.28
qs_1_scaffold_593 22 19328 bp 53.84 20.43 70.93
qs_1_scaffold_912 22 22910 bp 55.74 20.31 72.24
qs_1_scaffold_262 22 23410 bp 55.13 21.93 76.13
qs_1_scaffold_2091 22 22201 bp 59.79 21.22 89.94
qs_1_scaffold_290 22 22307 bp 55.16 22.04 76.72
qs_1_scaffold_1266 22 22916 bp 55.22 21.79 70.31
qs_1_scaffold_249 22 23839 bp 57.00 19.91 86.97
qs_1_scaffold_771 22 21113 bp 55.67 20.15 66.16
qs_1_scaffold_451
Domain: Viridiplantae (50%)
22 25054 bp 55.76 22.26 77.65
qs_1_scaffold_1439 22 18210 bp 55.35 21.35 92.03
qs_1_scaffold_1786 21 18031 bp 55.58 20.09 77.47
qs_1_scaffold_1051 21 20406 bp 54.87 20.76 65.39
qs_1_scaffold_892
Domain: Viridiplantae (61.9%)
21 27239 bp 54.53 22.16 78.85
qs_1_scaffold_537 21 18357 bp 53.90 21.77 70.16
qs_1_scaffold_1034 21 20028 bp 54.35 20.99 67.35
qs_1_scaffold_670 21 16380 bp 56.57 20.87 81.14
qs_1_scaffold_601 21 18727 bp 53.96 22.22 80.00
qs_1_scaffold_1201 21 24452 bp 57.57 19.49 85.43
Displaying items 101-150 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.