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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 51-100 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_2888 3 5852 bp 55.01 20.15 92.74
qs_1_scaffold_18355
Species: Pediculus humanus (50%)
2 1608 bp 46.95 6.53 92.72
qs_1_scaffold_1242
Domain: Viridiplantae (50%)
10 10171 bp 64.32 20.29 92.62
qs_1_scaffold_24692
Species: Strigamia maritima (50%)
2 1258 bp 63.59 5.41 92.53
qs_1_scaffold_3793 6 4957 bp 56.61 20.82 92.52
qs_1_scaffold_15547
Species: Tetraselmis sp. GSL018 (66.67%)
3 1836 bp 57.30 19.72 92.48
qs_1_scaffold_16191
Species: Sphaerobolus stellatus (50%)
2 1777 bp 70.74 10.58 92.18
qs_1_scaffold_3767 8 6541 bp 54.41 21.08 92.14
qs_1_scaffold_1439 22 18210 bp 55.35 21.35 92.03
qs_1_scaffold_3737
Domain: Viridiplantae (50%)
4 5001 bp 55.77 22.90 91.90
qs_1_scaffold_1671
Domain: Viridiplantae (57.14%)
7 8350 bp 63.51 19.28 91.76
qs_1_scaffold_1618 4 8540 bp 54.81 22.24 91.69
qs_1_scaffold_3005 5 6590 bp 57.95 20.53 91.68
qs_1_scaffold_268 21 23201 bp 56.28 21.08 91.34
qs_1_scaffold_32270
Species: Pneumocystis murina (100%)
1 1000 bp 68.30 5.40 91.20
qs_1_scaffold_1767 7 8018 bp 56.98 21.47 91.05
qs_1_scaffold_1326 9 9785 bp 54.81 21.88 90.66
qs_1_scaffold_5219 5 4009 bp 54.73 19.76 90.55
qs_1_scaffold_518 16 24677 bp 54.61 20.44 90.44
qs_1_scaffold_4794
Domain: Viridiplantae (60%)
5 6488 bp 63.90 19.79 90.40
qs_1_scaffold_2136 5 7177 bp 55.04 21.10 90.29
qs_1_scaffold_5970
Order: Mamiellales (50%)
6 3669 bp 54.84 22.62 90.27
qs_1_scaffold_4580
Domain: Viridiplantae (50%)
6 4356 bp 58.86 18.09 90.15
qs_1_scaffold_2080 3 7277 bp 56.74 22.03 90.12
qs_1_scaffold_2091 22 22201 bp 59.79 21.22 89.94
qs_1_scaffold_6723 5 4731 bp 53.69 20.57 89.92
qs_1_scaffold_723 10 13923 bp 53.44 22.60 89.46
qs_1_scaffold_6777 3 3367 bp 55.95 19.45 89.46
qs_1_scaffold_7430 6 3153 bp 59.34 16.68 89.44
qs_1_scaffold_1857 9 11113 bp 57.72 20.65 89.38
qs_1_scaffold_7629
Species: Micromonas sp. RCC299 (50%)
2 3105 bp 57.13 19.36 89.37
qs_1_scaffold_1278 11 9987 bp 54.20 21.88 89.37
qs_1_scaffold_2542 5 6940 bp 59.63 21.56 89.35
qs_1_scaffold_2447 3 6518 bp 55.23 21.79 89.29
qs_1_scaffold_4838 7 4206 bp 55.35 22.61 89.16
qs_1_scaffold_12062
Species: Lottia gigantea (50%)
2 2228 bp 65.31 10.28 89.14
qs_1_scaffold_2043
Domain: Viridiplantae (50%)
8 7344 bp 57.09 19.98 89.09
qs_1_scaffold_12703
Species: Chlorella variabilis (100%)
1 2149 bp 54.82 16.80 89.06
qs_1_scaffold_2145
Phylum: Chlorophyta (50%)
6 8326 bp 56.32 19.90 89.00
qs_1_scaffold_7606 6 3111 bp 58.92 20.57 88.91
qs_1_scaffold_1112 12 17846 bp 56.14 20.94 88.86
qs_1_scaffold_10660
Species: Toxoplasma gondii (50%)
2 2452 bp 56.81 19.33 88.83
qs_1_scaffold_2156 5 7717 bp 54.43 20.21 88.71
qs_1_scaffold_532 13 16529 bp 54.90 21.22 88.64
qs_1_scaffold_24101
Species: Scheffersomyces stipitis (50%)
2 1284 bp 67.91 17.13 88.55
qs_1_scaffold_22284
Species: Chlorella variabilis (50%)
2 1370 bp 69.93 17.88 88.47
qs_1_scaffold_11866
Phylum: Streptophyta (50%)
4 2256 bp 66.22 17.64 88.43
qs_1_scaffold_974 16 18196 bp 56.86 20.39 88.39
qs_1_scaffold_11951
Domain: Viridiplantae (50%)
10 4052 bp 38.72 221.50 88.33
qs_1_scaffold_2242 6 6914 bp 54.95 24.60 88.21
Displaying items 51-100 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.