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QS_4_Halobacteriales_71_28

In projects: QS_4  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QS_4_UNK

Properties

Avg. coverage: 28.22 Longest contig: 164.74 Kbp Bin length: 2.70 Mbp GC content: 70.65 %
Contigs count: 75 Features count: 2896 rRNAs count: 0 tRNAs count: 34

Genome completeness

near complete RP 34 / 55 MC: 3 BSCG 27 / 51 MC: 1 ASCG 34 / 38
Displaying items 1-50 of 75 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_3483
Order: Haloferacales (60%)
5 4589 bp 69.82 10.72 99.11
qs_4_scaffold_1149
Species: Halogranum salarium (57.14%)
14 12727 bp 71.61 27.66 95.98
qs_4_scaffold_1116
Class: Halobacteria (90%)
10 12982 bp 71.25 31.40 95.26
qs_4_scaffold_1059
Order: Halobacteriales (81.82%)
11 13536 bp 71.69 26.59 94.24
qs_4_scaffold_1186
Order: Natrialbales (51.72%)
29 23569 bp 71.50 28.92 93.85
qs_4_scaffold_606
Order: Halobacteriales (71.43%)
21 21246 bp 70.92 30.60 92.39
qs_4_scaffold_679
Order: Halobacteriales (78.38%)
37 40802 bp 68.94 29.17 91.97
qs_4_scaffold_731
Order: Halobacteriales (56.1%)
41 41466 bp 72.46 28.08 91.25
qs_4_scaffold_836
Species: Halogeometricum pallidum (75%)
20 16255 bp 70.11 26.10 90.49
qs_4_scaffold_490
Order: Halobacteriales (58.82%)
68 67587 bp 70.59 27.64 90.32
qs_4_scaffold_465
Order: Halobacteriales (59.09%)
22 26044 bp 70.88 28.13 90.19
qs_4_scaffold_1975
Order: Halobacteriales (77.78%)
9 9090 bp 72.63 28.22 90.13
qs_4_scaffold_250
Order: Halobacteriales (50%)
42 36648 bp 72.73 29.10 89.98
qs_4_scaffold_400
Class: Halobacteria (71.79%)
39 28547 bp 69.17 29.09 89.97
qs_4_scaffold_1678
Order: Halobacteriales (70%)
10 8929 bp 72.67 26.79 89.94
qs_4_scaffold_383
Order: Halobacteriales (73.68%)
38 33590 bp 71.39 29.10 89.88
qs_4_scaffold_636
Order: Halobacteriales (70.83%)
24 20753 bp 72.08 29.22 89.77
qs_4_scaffold_439
Class: Halobacteria (87.1%)
31 27129 bp 68.68 27.16 89.57
qs_4_scaffold_1476
Order: Halobacteriales (60%)
15 10125 bp 70.53 27.78 89.49
qs_4_scaffold_469
Order: Halobacteriales (54.55%)
22 25828 bp 69.99 27.17 89.30
qs_4_scaffold_259
Class: Halobacteria (82.61%)
46 44798 bp 71.33 28.61 89.21
qs_4_scaffold_313
Class: Halobacteria (87.27%)
55 53626 bp 69.13 27.23 89.11
qs_4_scaffold_314
Order: Halobacteriales (58.97%)
39 33105 bp 70.92 27.88 88.83
qs_4_scaffold_117
Class: Halobacteria (88.64%)
88 75895 bp 70.54 28.38 88.78
qs_4_scaffold_452
Order: Halobacteriales (54.1%)
61 56068 bp 70.08 28.13 88.78
qs_4_scaffold_538
Order: Halobacteriales (50%)
112 105974 bp 70.64 29.08 88.72
qs_4_scaffold_825
Class: Halobacteria (80.65%)
31 21082 bp 70.84 29.27 88.48
qs_4_scaffold_445
Order: Halobacteriales (62%)
50 44155 bp 71.93 29.73 88.39
qs_4_scaffold_210
Order: Halobacteriales (63.96%)
111 113638 bp 70.42 27.56 88.30
qs_4_scaffold_1281
Class: Halobacteria (84.62%)
13 11486 bp 71.69 28.99 88.18
qs_4_scaffold_450
Order: Halobacteriales (55%)
60 56773 bp 73.34 28.26 87.86
qs_4_scaffold_323
Order: Halobacteriales (61.29%)
62 57658 bp 71.73 28.61 87.76
qs_4_scaffold_419
Order: Halobacteriales (56.1%)
41 36692 bp 71.32 28.73 87.68
qs_4_scaffold_1231
Order: Halobacteriales (70.37%)
27 21804 bp 70.14 26.93 87.18
qs_4_scaffold_302
Order: Halobacteriales (56.1%)
41 38929 bp 71.00 29.65 87.17
qs_4_scaffold_413
Order: Halobacteriales (56.79%)
81 77865 bp 70.91 29.03 87.06
qs_4_scaffold_966
Order: Halobacteriales (50%)
18 17258 bp 69.70 28.57 87.06
qs_4_scaffold_585
Class: Halobacteria (90%)
40 33921 bp 70.50 29.22 86.73
qs_4_scaffold_1664
Order: Halobacteriales (55%)
20 14328 bp 67.68 27.64 86.70
qs_4_scaffold_93
Order: Halobacteriales (52.57%)
175 164742 bp 71.19 28.09 86.70
qs_4_scaffold_529
Class: Halobacteria (86.84%)
38 37234 bp 69.62 28.15 86.34
qs_4_scaffold_311
Order: Halobacteriales (54.29%)
35 34485 bp 70.38 27.54 86.16
qs_4_scaffold_735
Class: Halobacteria (80.49%)
41 44863 bp 70.22 26.85 86.04
qs_4_scaffold_875
Class: Halobacteria (89.74%)
39 32354 bp 70.64 27.33 85.96
qs_4_scaffold_92
Order: Halobacteriales (56.76%)
74 66832 bp 71.39 28.82 85.93
qs_4_scaffold_839
Order: Halobacteriales (51.16%)
43 39645 bp 71.40 27.29 85.83
qs_4_scaffold_1610
Order: Halobacteriales (58.82%)
17 11289 bp 70.74 27.21 85.78
qs_4_scaffold_494
Class: Halobacteria (81.63%)
49 42116 bp 72.45 29.65 85.75
qs_4_scaffold_1101
Order: Halobacteriales (53.85%)
13 13122 bp 70.12 26.32 85.73
qs_4_scaffold_1583
Order: Natrialbales (71.43%)
7 9475 bp 68.42 24.57 85.46
Displaying items 1-50 of 75 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.