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SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

SCNPILOT_EXPT_1000_BF_Hydrogenophilales_65_483
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 197 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_2323
Order: Hydrogenophilales (77.78%)
9 12178 bp 66.10 498.40 92.72
SCNpilot_expt_1000_bf_scaffold_4148
Species: GWE1_Thiobacillus_62_9_curated (55.56%)
9 7777 bp 66.16 539.12 90.34
SCNpilot_expt_1000_bf_scaffold_4692
Order: Hydrogenophilales (88.89%)
9 6437 bp 64.27 528.51 94.42
SCNpilot_expt_1000_bf_scaffold_7743
Order: Hydrogenophilales (100%)
9 7607 bp 65.83 512.98 74.06
SCNpilot_expt_1000_bf_scaffold_8461
Order: Hydrogenophilales (55.56%)
9 5452 bp 64.07 450.48 84.08
SCNpilot_expt_1000_bf_scaffold_22183
Order: Hydrogenophilales (87.5%)
8 6922 bp 61.41 378.58 87.89
SCNpilot_expt_1000_bf_scaffold_2962
Species: GWE1_Thiobacillus_62_9_curated (50%)
8 8836 bp 65.07 448.51 95.41
SCNpilot_expt_1000_bf_scaffold_2963
Species: GWE1_Thiobacillus_62_9_curated (62.5%)
8 8835 bp 59.09 506.99 85.98
SCNpilot_expt_1000_bf_scaffold_2213
Order: Gallionellales (50%)
8 10960 bp 60.14 311.66 95.80
SCNpilot_expt_1000_bf_scaffold_11103
Species: GWE1_Thiobacillus_62_9_curated (62.5%)
8 6621 bp 60.79 416.29 86.81
SCNpilot_expt_1000_bf_scaffold_8571
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 4147 bp 62.96 435.62 87.89
SCNpilot_expt_1000_bf_scaffold_6174
Order: Hydrogenophilales (85.71%)
7 6536 bp 67.50 510.29 95.93
SCNpilot_expt_1000_bf_scaffold_8889
Order: Hydrogenophilales (71.43%)
7 4039 bp 62.89 366.74 87.50
SCNpilot_expt_1000_bf_scaffold_10945
Phylum: Proteobacteria (85.71%)
7 6217 bp 61.25 464.73 75.37
SCNpilot_expt_1000_bf_scaffold_13638
Species: GWE1_Thiobacillus_62_9_curated (57.14%)
7 4698 bp 64.86 522.08 85.95
SCNpilot_expt_1000_bf_scaffold_6736
Order: Hydrogenophilales (85.71%)
7 4969 bp 66.19 528.68 83.62
SCNpilot_expt_1000_bf_scaffold_9074
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 3974 bp 61.95 452.00 94.82
SCNpilot_expt_1000_bf_scaffold_19124
Order: Hydrogenophilales (83.33%)
6 5461 bp 63.23 350.62 75.43
SCNpilot_expt_1000_bf_scaffold_6585
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 5050 bp 64.10 495.50 92.97
SCNpilot_expt_1000_bf_scaffold_10586
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 3529 bp 64.47 688.79 94.79
SCNpilot_expt_1000_bf_scaffold_8805
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 4067 bp 68.08 533.44 92.57
SCNpilot_expt_1000_bf_scaffold_8817
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 8473 bp 66.65 462.68 92.41
SCNpilot_expt_1000_bf_scaffold_8600
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 5739 bp 64.99 522.09 85.99
SCNpilot_expt_1000_bf_scaffold_6525
Order: Hydrogenophilales (66.67%)
6 5085 bp 64.27 521.68 84.72
SCNpilot_expt_1000_bf_scaffold_20410
Order: Hydrogenophilales (83.33%)
6 2776 bp 65.06 440.74 72.62
SCNpilot_expt_1000_bf_scaffold_20441
Order: Hydrogenophilales (60%)
5 3066 bp 67.74 540.93 70.06
SCNpilot_expt_1000_bf_scaffold_17161
Order: Hydrogenophilales (80%)
5 2383 bp 61.81 576.79 82.84
SCNpilot_expt_1000_bf_scaffold_10349
Order: Hydrogenophilales (100%)
5 3592 bp 66.09 578.23 97.47
SCNpilot_expt_1000_bf_scaffold_18731
Order: Hydrogenophilales (100%)
5 2216 bp 63.94 554.15 96.66
SCNpilot_expt_1000_bf_scaffold_26332
Class: Betaproteobacteria (60%)
5 3388 bp 64.67 544.05 91.29
SCNpilot_expt_1000_bf_scaffold_48773
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 3052 bp 66.12 406.21 62.71
SCNpilot_expt_1000_bf_scaffold_23310
Order: Hydrogenophilales (80%)
5 2411 bp 69.43 504.15 96.81
SCNpilot_expt_1000_bf_scaffold_14816
Order: Hydrogenophilales (60%)
5 4747 bp 64.08 365.70 87.91
SCNpilot_expt_1000_bf_scaffold_21531
Class: Betaproteobacteria (80%)
5 3594 bp 65.75 694.49 81.47
SCNpilot_expt_1000_bf_scaffold_4182
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 7351 bp 65.75 550.64 80.48
SCNpilot_expt_1000_bf_scaffold_13662
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 2874 bp 67.05 475.03 101.04
SCNpilot_expt_1000_bf_scaffold_15450
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 3420 bp 66.61 507.46 71.05
SCNpilot_expt_1000_bf_scaffold_9054
Order: Hydrogenophilales (100%)
5 3980 bp 67.59 594.60 96.56
SCNpilot_expt_1000_bf_scaffold_6031
Phylum: Proteobacteria (80%)
5 5374 bp 59.79 407.52 91.66
SCNpilot_expt_1000_bf_scaffold_41297
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 1711 bp 59.67 379.31 91.17
SCNpilot_expt_1000_bf_scaffold_26483
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
4 1883 bp 65.85 483.80 98.46
SCNpilot_expt_1000_bf_scaffold_19391
Order: Hydrogenophilales (50%)
4 3342 bp 63.17 466.34 83.75
SCNpilot_expt_1000_bf_scaffold_9628
Species: sediment metagenome (50%)
4 3794 bp 62.55 424.62 93.78
SCNpilot_expt_1000_bf_scaffold_1818
Order: Hydrogenophilales (50%)
4 12626 bp 66.22 433.95 98.01
SCNpilot_expt_1000_bf_scaffold_13045
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
4 2993 bp 65.82 585.78 95.42
SCNpilot_expt_1000_bf_scaffold_33110
Phylum: Proteobacteria (50%)
4 3061 bp 67.10 439.48 89.48
SCNpilot_expt_1000_bf_scaffold_12238
Order: Hydrogenophilales (50%)
4 3146 bp 63.89 401.78 89.07
SCNpilot_expt_1000_bf_scaffold_13585
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
4 3865 bp 66.08 534.15 83.21
SCNpilot_expt_1000_bf_scaffold_14032
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 2816 bp 66.30 497.87 95.13
SCNpilot_expt_1000_bf_scaffold_21546
Class: Betaproteobacteria (50%)
4 3321 bp 57.66 456.41 57.09
Displaying items 101-150 of 197 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.