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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 51-100 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_2026
Order: Rhizobiales (62.5%)
8 7183 bp 67.48 28.57 97.27
SCN18_26_2_15_R5_B_scaffold_2946
Class: Alphaproteobacteria (50%)
4 5185 bp 67.93 26.47 97.26
SCN18_26_2_15_R5_B_scaffold_1393
Order: Rhizobiales (55.56%)
9 9871 bp 67.15 27.47 97.22
SCN18_26_2_15_R5_B_scaffold_2583
Order: Rhizobiales (50%)
6 5749 bp 65.96 28.39 97.22
SCN18_26_2_15_R5_B_scaffold_1982
Class: Alphaproteobacteria (50%)
8 7282 bp 65.39 22.70 97.18
SCN18_26_2_15_R5_B_scaffold_1705
Class: Alphaproteobacteria (66.67%)
9 8265 bp 64.97 26.24 97.02
SCN18_26_2_15_R5_B_scaffold_924
Class: Alphaproteobacteria (61.11%)
18 14889 bp 67.20 28.75 97.02
SCN18_26_2_15_R5_B_scaffold_4279
Order: Rhizobiales (50%)
4 3761 bp 67.67 23.01 97.00
SCN18_26_2_15_R5_B_scaffold_2560
Class: Alphaproteobacteria (100%)
7 5784 bp 66.58 26.92 96.94
SCN18_26_2_15_R5_B_scaffold_1968
Class: Alphaproteobacteria (50%)
6 7341 bp 68.04 28.12 96.85
SCN18_26_2_15_R5_B_scaffold_1969
Order: Rhizobiales (62.5%)
8 7338 bp 62.88 26.57 96.85
SCN18_26_2_15_R5_B_scaffold_877
Class: Alphaproteobacteria (52.38%)
21 15758 bp 66.63 27.20 96.83
SCN18_26_2_15_R5_B_scaffold_1560
Class: Alphaproteobacteria (63.64%)
11 8907 bp 64.02 27.28 96.77
SCN18_26_2_15_R5_B_scaffold_1686
Order: Rhizobiales (87.5%)
8 8316 bp 65.93 25.45 96.75
SCN18_26_2_15_R5_B_scaffold_1061
Order: Rhodospirillales (58.33%)
12 12933 bp 65.98 25.67 96.64
SCN18_26_2_15_R5_B_scaffold_3110
Class: Alphaproteobacteria (80%)
5 4958 bp 67.93 27.08 96.63
SCN18_26_2_15_R5_B_scaffold_746
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (60%)
15 19108 bp 66.90 27.26 96.60
SCN18_26_2_15_R5_B_scaffold_447
Class: Alphaproteobacteria (51.85%)
27 32718 bp 66.12 27.60 96.59
SCN18_26_2_15_R5_B_scaffold_2438
Class: Alphaproteobacteria (50%)
8 6063 bp 66.58 24.52 96.54
SCN18_26_2_15_R5_B_scaffold_9637
Class: Alphaproteobacteria (50%)
4 1856 bp 65.52 21.66 96.50
SCN18_26_2_15_R5_B_scaffold_639
Phylum: Proteobacteria (82.35%)
17 21920 bp 67.77 29.44 96.47
SCN18_26_2_15_R5_B_scaffold_1088
Order: Rhizobiales (50%)
12 12674 bp 68.53 25.49 96.43
SCN18_26_2_15_R5_B_scaffold_1056
Class: Alphaproteobacteria (76.92%)
13 13023 bp 65.28 27.93 96.43
SCN18_26_2_15_R5_B_scaffold_954
Class: Alphaproteobacteria (73.33%)
15 14494 bp 66.31 27.27 96.39
SCN18_26_2_15_R5_B_scaffold_2419
Class: Alphaproteobacteria (57.14%)
7 6107 bp 65.58 27.26 96.28
SCN18_26_2_15_R5_B_scaffold_1200
Class: Alphaproteobacteria (66.67%)
12 11528 bp 67.58 26.56 96.26
SCN18_26_2_15_R5_B_scaffold_1380
Class: Alphaproteobacteria (80%)
10 9983 bp 65.92 29.45 96.25
SCN18_26_2_15_R5_B_scaffold_1368
Class: Alphaproteobacteria (50%)
12 10065 bp 66.15 25.75 96.24
SCN18_26_2_15_R5_B_scaffold_1155
Order: Rhizobiales (66.67%)
6 12007 bp 66.60 25.54 96.24
SCN18_26_2_15_R5_B_scaffold_871
Class: Alphaproteobacteria (65%)
20 15958 bp 64.88 27.81 96.22
SCN18_26_2_15_R5_B_scaffold_3199
Class: Alphaproteobacteria (83.33%)
6 4837 bp 66.05 22.27 96.20
SCN18_26_2_15_R5_B_scaffold_1317
Class: Alphaproteobacteria (55.56%)
9 10437 bp 64.79 28.99 96.00
SCN18_26_2_15_R5_B_scaffold_2789
Class: Alphaproteobacteria (62.5%)
8 5408 bp 66.38 22.47 95.97
SCN18_26_2_15_R5_B_scaffold_1574
Class: Alphaproteobacteria (60%)
5 8850 bp 69.37 24.95 95.93
SCN18_26_2_15_R5_B_scaffold_1646
Order: Rhodospirillales (60%)
10 8489 bp 68.31 28.48 95.91
SCN18_26_2_15_R5_B_scaffold_2381
Class: Alphaproteobacteria (75%)
8 6206 bp 67.84 25.91 95.91
SCN18_26_2_15_R5_B_scaffold_2860
Order: Rhizobiales (50%)
6 5297 bp 68.64 17.56 95.88
SCN18_26_2_15_R5_B_scaffold_6378
Class: Alphaproteobacteria (66.67%)
3 2707 bp 69.97 22.55 95.86
SCN18_26_2_15_R5_B_scaffold_9748
Phylum: Proteobacteria (50%)
4 1838 bp 68.44 19.02 95.81
SCN18_26_2_15_R5_B_scaffold_2335
Order: Rhizobiales (60%)
5 6317 bp 65.52 26.67 95.74
SCN18_26_2_15_R5_B_scaffold_1132
Order: Rhizobiales (70%)
10 12211 bp 65.80 28.00 95.74
SCN18_26_2_15_R5_B_scaffold_2274
Class: Alphaproteobacteria (66.67%)
6 6476 bp 68.10 25.18 95.71
SCN18_26_2_15_R5_B_scaffold_5256
Class: Alphaproteobacteria (50%)
4 3213 bp 67.51 27.17 95.70
SCN18_26_2_15_R5_B_scaffold_810
Phylum: Proteobacteria (73.68%)
19 17470 bp 67.33 26.70 95.70
SCN18_26_2_15_R5_B_scaffold_615
Class: Alphaproteobacteria (84%)
25 22872 bp 67.52 28.89 95.70
SCN18_26_2_15_R5_B_scaffold_209
Class: Alphaproteobacteria (57.35%)
68 69867 bp 66.23 28.58 95.68
SCN18_26_2_15_R5_B_scaffold_1184
Class: Alphaproteobacteria (50%)
10 11703 bp 66.53 28.83 95.67
SCN18_26_2_15_R5_B_scaffold_1020
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (53.33%)
15 13492 bp 66.84 28.76 95.66
SCN18_26_2_15_R5_B_scaffold_1230
Order: Rhizobiales (63.64%)
11 11253 bp 66.08 25.38 95.65
SCN18_26_2_15_R5_B_scaffold_3773
Class: Alphaproteobacteria (50%)
6 4209 bp 66.55 23.45 95.65
Displaying items 51-100 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.