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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 201-250 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_10301
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (50%)
2 1747 bp 69.49 18.89 93.76
SCN18_26_2_15_R5_B_scaffold_697
Class: Alphaproteobacteria (57.14%)
21 20260 bp 66.41 26.68 93.75
SCN18_26_2_15_R5_B_scaffold_371
Phylum: Proteobacteria (79.41%)
34 39606 bp 66.78 29.05 93.74
SCN18_26_2_15_R5_B_scaffold_1327
Class: Alphaproteobacteria (80%)
10 10344 bp 66.60 27.36 93.74
SCN18_26_2_15_R5_B_scaffold_344
Class: Alphaproteobacteria (60.87%)
46 43645 bp 65.59 26.85 93.72
SCN18_26_2_15_R5_B_scaffold_282
Class: Alphaproteobacteria (64.81%)
54 52310 bp 66.85 28.36 93.72
SCN18_26_2_15_R5_B_scaffold_1406
Order: Rhizobiales (66.67%)
6 9796 bp 67.50 26.60 93.68
SCN18_26_2_15_R5_B_scaffold_748
Class: Alphaproteobacteria (57.89%)
19 19030 bp 66.75 27.53 93.67
SCN18_26_2_15_R5_B_scaffold_1046
Class: Alphaproteobacteria (66.67%)
12 13177 bp 65.77 28.97 93.66
SCN18_26_2_15_R5_B_scaffold_725
Class: Alphaproteobacteria (65%)
20 19549 bp 66.22 27.03 93.66
SCN18_26_2_15_R5_B_scaffold_9047
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (50%)
2 1967 bp 67.92 11.06 93.65
SCN18_26_2_15_R5_B_scaffold_1218
Phylum: Proteobacteria (72.22%)
18 11384 bp 64.72 26.87 93.64
SCN18_26_2_15_R5_B_scaffold_479
Phylum: Proteobacteria (80%)
20 30611 bp 66.43 27.63 93.63
SCN18_26_2_15_R5_B_scaffold_3837
Order: Rhizobiales (80%)
5 4147 bp 66.12 25.39 93.61
SCN18_26_2_15_R5_B_scaffold_1110
Class: Alphaproteobacteria (71.43%)
14 12420 bp 67.03 26.18 93.60
SCN18_26_2_15_R5_B_scaffold_170
Class: Alphaproteobacteria (79.35%)
92 89804 bp 66.00 28.44 93.56
SCN18_26_2_15_R5_B_scaffold_511
Class: Alphaproteobacteria (86.67%)
30 28036 bp 67.38 29.06 93.49
SCN18_26_2_15_R5_B_scaffold_557
Class: Alphaproteobacteria (64.52%)
31 25564 bp 67.39 28.24 93.47
SCN18_26_2_15_R5_B_scaffold_304
Class: Alphaproteobacteria (58.7%)
46 49072 bp 66.71 27.50 93.44
SCN18_26_2_15_R5_B_scaffold_607
Order: Rhodospirillales (52.38%)
21 23283 bp 67.15 26.18 93.44
SCN18_26_2_15_R5_B_scaffold_432
Class: Alphaproteobacteria (69.23%)
39 34170 bp 65.14 26.57 93.43
SCN18_26_2_15_R5_B_scaffold_618
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (70%)
20 22795 bp 67.54 26.58 93.43
SCN18_26_2_15_R5_B_scaffold_913
Class: Alphaproteobacteria (71.43%)
14 15116 bp 67.27 28.06 93.42
SCN18_26_2_15_R5_B_scaffold_1245
Class: Alphaproteobacteria (92.31%)
13 11145 bp 67.51 25.90 93.41
SCN18_26_2_15_R5_B_scaffold_1074
Class: Alphaproteobacteria (78.57%)
14 12822 bp 66.21 23.03 93.40
SCN18_26_2_15_R5_B_scaffold_658
Class: Alphaproteobacteria (52.38%)
21 21463 bp 66.41 27.36 93.40
SCN18_26_2_15_R5_B_scaffold_1025
Class: Alphaproteobacteria (85.71%)
14 13446 bp 66.55 27.12 93.40
SCN18_26_2_15_R5_B_scaffold_294
Order: Rhodospirillales (61.22%)
49 50073 bp 65.49 26.29 93.36
SCN18_26_2_15_R5_B_scaffold_1313
Class: Alphaproteobacteria (75%)
12 10490 bp 66.25 24.72 93.35
SCN18_26_2_15_R5_B_scaffold_1354
Class: Alphaproteobacteria (70%)
10 10159 bp 65.68 27.20 93.32
SCN18_26_2_15_R5_B_scaffold_8487
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2077 bp 67.40 26.36 93.31
SCN18_26_2_15_R5_B_scaffold_666
Class: Alphaproteobacteria (81.48%)
27 21242 bp 66.00 27.15 93.27
SCN18_26_2_15_R5_B_scaffold_855
Class: Alphaproteobacteria (57.14%)
14 16264 bp 65.46 29.18 93.26
SCN18_26_2_15_R5_B_scaffold_2852
Class: Alphaproteobacteria (55.56%)
9 5304 bp 66.82 24.83 93.21
SCN18_26_2_15_R5_B_scaffold_399
Class: Alphaproteobacteria (51.72%)
29 36500 bp 64.19 29.20 93.16
SCN18_26_2_15_R5_B_scaffold_978
Class: Alphaproteobacteria (50%)
14 13980 bp 65.46 27.83 93.15
SCN18_26_2_15_R5_B_scaffold_6241
Class: Alphaproteobacteria (55.56%)
9 4020 bp 65.10 23.84 93.13
SCN18_26_2_15_R5_B_scaffold_228
Phylum: Proteobacteria (83.33%)
60 63280 bp 64.44 28.85 93.11
SCN18_26_2_15_R5_B_scaffold_1243
Class: Alphaproteobacteria (63.64%)
11 11157 bp 65.64 27.13 93.09
SCN18_26_2_15_R5_B_scaffold_147
Class: Alphaproteobacteria (64.77%)
88 101792 bp 66.00 27.24 93.08
SCN18_26_2_15_R5_B_scaffold_318
Class: Alphaproteobacteria (55.32%)
47 69996 bp 62.86 20.41 93.08
SCN18_26_2_15_R5_B_scaffold_11281
Class: Alphaproteobacteria (66.67%)
3 1615 bp 66.81 14.86 93.07
SCN18_26_2_15_R5_B_scaffold_1143
Phylum: Proteobacteria (92.31%)
13 12098 bp 65.43 28.98 93.07
SCN18_26_2_15_R5_B_scaffold_211
Class: Alphaproteobacteria (78.79%)
66 68914 bp 64.98 26.97 93.06
SCN18_26_2_15_R5_B_scaffold_645
Class: Alphaproteobacteria (69.23%)
26 21777 bp 65.94 26.13 93.06
SCN18_26_2_15_R5_B_scaffold_5681
Class: Alphaproteobacteria (50%)
4 3015 bp 65.44 22.64 93.03
SCN18_26_2_15_R5_B_scaffold_538
Class: Alphaproteobacteria (70.83%)
24 26595 bp 66.11 28.43 93.03
SCN18_26_2_15_R5_B_scaffold_1453
Phylum: Proteobacteria (77.78%)
9 9481 bp 66.08 25.30 93.03
SCN18_26_2_15_R5_B_scaffold_10186
Species: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 (50%)
2 1764 bp 68.14 15.90 93.03
SCN18_26_2_15_R5_B_scaffold_73
Class: Alphaproteobacteria (67.44%)
172 183987 bp 66.10 28.47 92.99
Displaying items 201-250 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.