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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 101-150 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_662
Species: CN-SCN_Devosia_27x (100%)
9 21392 bp 65.68 30.45 95.62
SCN18_26_2_15_R5_B_scaffold_509
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
29 28206 bp 67.23 28.62 95.60
SCN18_26_2_15_R5_B_scaffold_2076
Class: Alphaproteobacteria (66.67%)
3 7046 bp 65.43 29.23 95.54
SCN18_26_2_15_R5_B_scaffold_3411
Phylum: Proteobacteria (66.67%)
3 4584 bp 65.21 28.01 95.48
SCN18_26_2_15_R5_B_scaffold_1318
Order: Rhizobiales (90.91%)
11 10422 bp 66.65 26.66 95.48
SCN18_26_2_15_R5_B_scaffold_728
Class: Alphaproteobacteria (72%)
25 19512 bp 66.55 27.93 95.43
SCN18_26_2_15_R5_B_scaffold_1315
Order: Rhizobiales (66.67%)
9 10477 bp 66.66 26.56 95.41
SCN18_26_2_15_R5_B_scaffold_306
Class: Alphaproteobacteria (62.26%)
53 47988 bp 66.72 27.95 95.41
SCN18_26_2_15_R5_B_scaffold_1806
Class: Alphaproteobacteria (83.33%)
6 7866 bp 67.30 26.93 95.39
SCN18_26_2_15_R5_B_scaffold_1303
Phylum: Proteobacteria (90.91%)
11 10574 bp 66.08 27.31 95.38
SCN18_26_2_15_R5_B_scaffold_384
Class: Alphaproteobacteria (78.38%)
37 37953 bp 65.50 28.60 95.38
SCN18_26_2_15_R5_B_scaffold_4235
Class: Alphaproteobacteria (66.67%)
3 3797 bp 65.92 20.42 95.36
SCN18_26_2_15_R5_B_scaffold_592
Class: Alphaproteobacteria (79.49%)
39 24108 bp 66.24 27.88 95.33
SCN18_26_2_15_R5_B_scaffold_369
Class: Alphaproteobacteria (77.14%)
35 40191 bp 66.31 28.46 95.32
SCN18_26_2_15_R5_B_scaffold_685
Class: Alphaproteobacteria (64.71%)
17 20594 bp 64.63 29.67 95.29
SCN18_26_2_15_R5_B_scaffold_7070
Species: R_Alphaproteobacteria_66_14 (50%)
4 2478 bp 67.76 10.71 95.28
SCN18_26_2_15_R5_B_scaffold_3303
Class: Alphaproteobacteria (85.71%)
7 4708 bp 68.82 22.84 95.26
SCN18_26_2_15_R5_B_scaffold_105
Class: Alphaproteobacteria (71.85%)
135 140439 bp 66.25 27.88 95.20
SCN18_26_2_15_R5_B_scaffold_4107
Class: Alphaproteobacteria (66.67%)
6 3889 bp 67.47 26.07 95.19
SCN18_26_2_15_R5_B_scaffold_2077
Species: CN-SCN_Devosia_27x (100%)
4 7041 bp 69.29 28.53 95.19
SCN18_26_2_15_R5_B_scaffold_261
Class: Alphaproteobacteria (67.19%)
64 55849 bp 65.35 28.23 95.18
SCN18_26_2_15_R5_B_scaffold_363
Class: Alphaproteobacteria (68.42%)
38 41244 bp 67.07 28.61 95.16
SCN18_26_2_15_R5_B_scaffold_1302
Class: Alphaproteobacteria (100%)
10 10583 bp 64.03 28.21 95.16
SCN18_26_2_15_R5_B_scaffold_946
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
18 14578 bp 67.12 26.23 95.16
SCN18_26_2_15_R5_B_scaffold_986
Class: Alphaproteobacteria (66.67%)
15 13904 bp 67.76 26.79 95.15
SCN18_26_2_15_R5_B_scaffold_9127
Class: Alphaproteobacteria (66.67%)
3 1949 bp 65.11 25.94 95.13
SCN18_26_2_15_R5_B_scaffold_289
Class: Alphaproteobacteria (58.82%)
51 51406 bp 66.02 27.33 95.13
SCN18_26_2_15_R5_B_scaffold_297
Class: Alphaproteobacteria (59.18%)
49 49948 bp 64.72 27.75 95.12
SCN18_26_2_15_R5_B_scaffold_5284
Order: Rhizobiales (50%)
4 3201 bp 66.60 19.40 95.03
SCN18_26_2_15_R5_B_scaffold_4491
Phylum: Proteobacteria (50%)
6 3628 bp 66.12 19.85 95.01
SCN18_26_2_15_R5_B_scaffold_1107
Class: Alphaproteobacteria (88.89%)
9 12434 bp 67.17 26.09 94.99
SCN18_26_2_15_R5_B_scaffold_659
Species: CN-SCN_Devosia_27x (92.86%)
14 21433 bp 66.03 29.86 94.98
SCN18_26_2_15_R5_B_scaffold_2907
Order: Rhizobiales (50%)
6 5228 bp 66.66 25.74 94.97
SCN18_26_2_15_R5_B_scaffold_2623
Order: Rhizobiales (80%)
5 5684 bp 64.74 23.88 94.95
SCN18_26_2_15_R5_B_scaffold_4171
Species: SCNPILOT_SOLID2_TRIM150_Afipia_61_20 (50%)
4 3842 bp 66.50 23.97 94.95
SCN18_26_2_15_R5_B_scaffold_7935
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 2216 bp 67.06 25.25 94.90
SCN18_26_2_15_R5_B_scaffold_496
Class: Alphaproteobacteria (68.75%)
32 29159 bp 65.09 27.71 94.88
SCN18_26_2_15_R5_B_scaffold_872
Order: Rhizobiales (70.59%)
17 15942 bp 66.46 26.84 94.83
SCN18_26_2_15_R5_B_scaffold_4684
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
4 3512 bp 67.23 24.13 94.82
SCN18_26_2_15_R5_B_scaffold_443
Class: Alphaproteobacteria (77.42%)
31 32873 bp 66.16 27.41 94.81
SCN18_26_2_15_R5_B_scaffold_680
Class: Alphaproteobacteria (76.47%)
17 20786 bp 67.57 28.50 94.81
SCN18_26_2_15_R5_B_scaffold_510
Class: Alphaproteobacteria (53.85%)
26 28189 bp 66.30 27.41 94.76
SCN18_26_2_15_R5_B_scaffold_11255
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (50%)
2 1618 bp 67.61 20.58 94.75
SCN18_26_2_15_R5_B_scaffold_518
Class: Alphaproteobacteria (85.71%)
28 27801 bp 67.86 25.61 94.73
SCN18_26_2_15_R5_B_scaffold_7509
Class: Alphaproteobacteria (66.67%)
3 2331 bp 66.58 23.23 94.72
SCN18_26_2_15_R5_B_scaffold_1212
Class: Alphaproteobacteria (80%)
5 11441 bp 66.01 26.92 94.71
SCN18_26_2_15_R5_B_scaffold_644
Class: Alphaproteobacteria (61.9%)
21 21781 bp 67.22 27.08 94.71
SCN18_26_2_15_R5_B_scaffold_10660
Species: SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 (100%)
2 1696 bp 69.69 22.82 94.63
SCN18_26_2_15_R5_B_scaffold_1075
Order: Rhizobiales (50%)
12 12789 bp 66.80 24.62 94.60
SCN18_26_2_15_R5_B_scaffold_1545
Class: Alphaproteobacteria (88.89%)
9 9007 bp 64.91 27.20 94.59
Displaying items 101-150 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.