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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 151-200 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_17196 PHE14_225
Species: R_Phenylobacterium_70_10 (57.14%)
7 5999 bp 69.86 13.79 97.12
cn_combo_scaffold_6357 PHE14_94
Species: R_Phenylobacterium_70_10 (55.56%)
9 9510 bp 70.43 13.79 96.72
cn_combo_scaffold_7186 PHE14_110
Order: Caulobacterales (55.56%)
9 8512 bp 71.24 13.75 89.27
cn_combo_scaffold_8122 PHE14_132
Order: Caulobacterales (61.54%)
13 7657 bp 67.77 13.74 88.59
cn_combo_scaffold_8479 PHE14_134
Species: Phenylobacterium zucineum (62.5%)
8 7367 bp 72.00 13.74 96.10
cn_combo_scaffold_10555 PHE14_181
Order: Caulobacterales (57.14%)
7 6001 bp 69.67 13.73 95.28
cn_combo_scaffold_16534 PHE14_224
Order: Caulobacterales (100%)
6 7390 bp 70.34 13.73 85.86
cn_combo_scaffold_2531 PHE14_16
Order: Caulobacterales (79.17%)
24 21928 bp 69.85 13.73 93.15
cn_combo_scaffold_7705 PHE14_123
Order: Caulobacterales (77.78%)
9 8010 bp 66.90 13.73 87.82
cn_combo_scaffold_7884 PHE14_127
Genus: Caulobacter (57.14%)
7 7856 bp 67.20 13.73 89.59
cn_combo_scaffold_14060 PHE14_222
Species: R_Phenylobacterium_70_10 (50%)
8 6383 bp 71.63 13.69 93.53
cn_combo_scaffold_10671 PHE14_239
Class: Alphaproteobacteria (57.14%)
7 5937 bp 71.47 13.69 98.48
cn_combo_scaffold_7260 PHE14_112
Order: Caulobacterales (88.89%)
9 8437 bp 72.75 13.69 95.69
cn_combo_scaffold_10314 PHE14_171
Order: Caulobacterales (50%)
8 6141 bp 67.50 13.66 84.35
cn_combo_scaffold_10557 PHE14_180
Order: Caulobacterales (100%)
7 6001 bp 70.60 13.63 93.98
cn_combo_scaffold_3546 PHE14_30
Order: Caulobacterales (57.89%)
19 16209 bp 70.54 13.62 91.21
cn_combo_scaffold_5900 PHE14_77
Order: Caulobacterales (62.5%)
16 10148 bp 68.66 13.59 81.59
cn_combo_scaffold_11475 PHE14_245
Class: Alphaproteobacteria (77.78%)
9 5544 bp 69.39 13.58 91.34
cn_combo_scaffold_10662 PHE14_183
Order: Caulobacterales (60%)
5 5945 bp 71.46 13.56 94.87
cn_combo_scaffold_4870 PHE14_58
Order: Caulobacterales (83.33%)
12 12089 bp 69.85 13.56 98.30
cn_combo_scaffold_6451 PHE14_98
Order: Caulobacterales (81.82%)
11 9372 bp 70.70 13.55 96.03
cn_combo_scaffold_10030 PHE14_165
Order: Caulobacterales (100%)
5 6298 bp 71.51 13.54 95.51
cn_combo_scaffold_8451 PHE14_237
Class: Alphaproteobacteria (57.14%)
7 7387 bp 68.50 13.54 93.16
cn_combo_scaffold_2284 PHE14_10
Order: Caulobacterales (83.33%)
18 23880 bp 68.45 13.52 95.04
cn_combo_scaffold_2409 PHE14_13
Genus: Caulobacter (50%)
18 22843 bp 68.14 13.50 94.14
cn_combo_scaffold_8914 PHE14_143
Genus: Caulobacter (50%)
8 8225 bp 70.87 13.47 90.71
cn_combo_scaffold_8723 PHE14_135
Order: Caulobacterales (71.43%)
7 7193 bp 70.62 13.43 93.47
cn_combo_scaffold_8802 PHE14_139
Order: Caulobacterales (80.95%)
21 17566 bp 68.59 13.40 92.48
cn_combo_scaffold_8801 PHE14_138
Order: Caulobacterales (55.56%)
9 7146 bp 70.68 13.39 92.53
cn_combo_scaffold_7346 PHE14_115
Species: R_Phenylobacterium_70_10 (50%)
10 10462 bp 68.62 13.39 92.85
cn_combo_scaffold_3734 PHE14_33
Order: Caulobacterales (94.12%)
17 15468 bp 68.48 13.37 92.13
cn_combo_scaffold_13506 PHE14_221
Class: Alphaproteobacteria (100%)
5 6959 bp 68.53 13.36 77.77
cn_combo_scaffold_9329 PHE14_150
Order: Caulobacterales (100%)
8 6728 bp 69.72 13.35 90.78
cn_combo_scaffold_9774 PHE14_160
Order: Caulobacterales (71.43%)
7 6455 bp 67.59 13.34 86.12
cn_combo_scaffold_12012 PHE14_210
Species: R_Phenylobacterium_69_31 (50%)
10 8155 bp 67.53 13.34 90.75
cn_combo_scaffold_11060 PHE14_190
Order: Caulobacterales (77.78%)
9 5745 bp 68.41 13.32 92.06
cn_combo_scaffold_10448 PHE14_175
Order: Caulobacterales (66.67%)
6 6061 bp 69.96 13.31 96.47
cn_combo_scaffold_9100 PHE14_147
Order: Caulobacterales (80%)
5 6915 bp 68.84 13.30 90.59
cn_combo_scaffold_5528 PHE14_64
Order: Caulobacterales (90%)
10 10784 bp 71.81 13.26 95.84
cn_combo_scaffold_13147 PHE14_220
Genus: Caulobacter (54.55%)
11 7476 bp 71.20 13.23 81.94
cn_combo_scaffold_8739 PHE14_136
Species: R_Phenylobacterium_70_10 (50%)
8 7184 bp 70.16 13.22 94.46
cn_combo_scaffold_2043 PHE14_7
Order: Caulobacterales (75.68%)
37 35477 bp 66.47 13.18 89.16
cn_combo_scaffold_11140 PHE14_191
Order: Caulobacterales (100%)
7 5704 bp 69.35 13.13 93.78
cn_combo_scaffold_9114 PHE14_148
Species: R_Phenylobacterium_69_31 (57.14%)
7 6901 bp 68.95 13.04 92.33
cn_combo_scaffold_5977 PHE14_83
Order: Caulobacterales (90.91%)
11 10023 bp 68.61 13.04 88.15
cn_combo_scaffold_6447 PHE14_97
Species: Caulobacter segnis (71.43%)
7 9382 bp 69.42 13.04 91.13
cn_combo_scaffold_6488 PHE14_99
Order: Caulobacterales (81.25%)
16 16429 bp 69.04 12.98 90.04
cn_combo_scaffold_12053 PHE14_241
Order: Caulobacterales (50%)
6 5291 bp 69.40 12.98 91.12
cn_combo_scaffold_7350 PHE14_114
Order: Caulobacterales (88.89%)
9 8348 bp 67.73 12.94 92.11
cn_combo_scaffold_4669 PHE14_52
Order: Caulobacterales (85.71%)
14 15158 bp 69.75 12.93 92.24
Displaying items 151-200 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.