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SCNpilot_bf_inoc_scaffold_69_curated

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Displaying items 91-120 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_69_curated_91
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105529..106260)
DNA (732bp) protein (244aa)
XRE family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI0002DA5520
XRE family transcriptional regulator {ECO:0000313|EMBL:KJV25432.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_bf_inoc_scaffold_69_curated_92
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106409..106945)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003705DE2
GDSL family lipase {ECO:0000313|EMBL:GAN45272.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lysophospholipase L1-like esterase
SCNpilot_bf_inoc_scaffold_69_curated_93
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107022..107711
DNA (690bp) protein (230aa)
ABC transporter n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DED57
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component {ECO:0000313|EMBL:EIL91090.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component
SCNpilot_bf_inoc_scaffold_69_curated_94
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107708..110185
DNA (2478bp) protein (826aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003609BDB
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:AGG88041.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_69_curated_95
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110338..111282
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364BAA6
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_69_curated_96
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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111346..112092
DNA (747bp) protein (249aa)
electron transfer flavoprotein subunit beta n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C94D4
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KFN49404.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
SCNpilot_bf_inoc_scaffold_69_curated_97
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112154..113095
DNA (942bp) protein (314aa)
electron transfer flavoprotein subunit beta n=1 Tax=Rudaea cellulosilytica RepID=UPI000375A6E2
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:GAN45655.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
electron transfer flavoprotein, alpha subunit
SCNpilot_bf_inoc_scaffold_69_curated_98
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113248..115470
DNA (2223bp) protein (741aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6E83F
Uncharacterized protein {ECO:0000313|EMBL:KFN43668.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_69_curated_99
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115630..117114
DNA (1485bp) protein (495aa)
acetoacetyl-CoA synthetase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
Acetoacetyl-CoA synthetase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AVR1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFN42616.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
SCNpilot_bf_inoc_scaffold_69_curated_100
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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117111..118058
DNA (948bp) protein (316aa)
Lipopolysaccharide biosynthesis protein n=2 Tax=Pseudomonas syringae group RepID=Q888F6_PSESM
Strain LMCA8 contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31603.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas viridiflava.;"
lipopolysaccharide biosynthesis protein rbh
SCNpilot_bf_inoc_scaffold_69_curated_101
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118055..119722)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D5E85
Uncharacterized protein {ECO:0000313|EMBL:EIM01000.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_69_curated_102
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119863..121917)
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379B4F0
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:EIL93585.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tetratricopeptide repeat protein
SCNpilot_bf_inoc_scaffold_69_curated_103
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121914..122915)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CCB42
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EIL93586.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Mg-chelatase subunit ChlD
SCNpilot_bf_inoc_scaffold_69_curated_104
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122908..123381)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B8B10
Uncharacterized protein {ECO:0000313|EMBL:GAE54821.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_69_curated_105
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123381..124316)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E76AB
Uncharacterized protein {ECO:0000313|EMBL:AIF46838.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_69_curated_106
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124373..125368)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373F096
MoxR-like ATPase {ECO:0000313|EMBL:EIM01005.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase
SCNpilot_bf_inoc_scaffold_69_curated_107
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125578..126780)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B55AE2
Uncharacterized protein {ECO:0000313|EMBL:KFN42003.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
cyclic nucleotide-binding protein
SCNpilot_bf_inoc_scaffold_69_curated_108
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126915..129623)
DNA (2709bp) protein (903aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DD853
Uncharacterized protein {ECO:0000313|EMBL:AHF00265.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Ig family protein
SCNpilot_bf_inoc_scaffold_69_curated_109
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129705..131996)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003743693
Pilus assembly protein PilP {ECO:0000313|EMBL:GAN45365.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV pilus secretin PilQ/competence protein; K02666 type IV pilus assembly protein PilQ
SCNpilot_bf_inoc_scaffold_69_curated_110
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132020..132568)
DNA (549bp) protein (183aa)
Pilus assembly protein PilP n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS65_9GAMM
Pilus assembly protein PilP {ECO:0000313|EMBL:GAN45366.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Tfp pilus assembly protein PilP
SCNpilot_bf_inoc_scaffold_69_curated_111
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132565..133275)
DNA (711bp) protein (237aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2A1_9GAMM
Fimbrial protein {ECO:0000313|EMBL:GAN45367.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Tfp pilus assembly protein PilO
SCNpilot_bf_inoc_scaffold_69_curated_112
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133272..133898)
DNA (627bp) protein (209aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS67_9GAMM
Fimbrial assembly protein {ECO:0000313|EMBL:GAN45368.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Tfp pilus assembly protein PilN
SCNpilot_bf_inoc_scaffold_69_curated_113
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133898..134956)
DNA (1059bp) protein (353aa)
fimbrial assembly protein n=1 Tax=Dyella japonica RepID=UPI0002D78188
Pilus assembly protein PilM {ECO:0000313|EMBL:GAN45369.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV pilus assembly protein PilM
SCNpilot_bf_inoc_scaffold_69_curated_114
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135194..137722
DNA (2529bp) protein (843aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C251E
Penicillin-binding protein {ECO:0000313|EMBL:AIF46831.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
penicillin-binding protein, 1A family
SCNpilot_bf_inoc_scaffold_69_curated_115
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137722..138360
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45828.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_69_curated_116
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138540..139832)
DNA (1293bp) protein (431aa)
citrate synthase I, hexameric type (EC:2.3.3.1)
type II citrate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI000365B49B
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_69_curated_117
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(140127..140375)
DNA (249bp) protein (83aa)
50S ribosomal protein L31 n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZI56_XANCT
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
rpmE2; 50S ribosomal protein L31 type B; K02909 large subunit ribosomal protein L31
SCNpilot_bf_inoc_scaffold_69_curated_118
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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140589..144689
DNA (4101bp) protein (1367aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E8186
mechanosensitive ion channel MscS; K05802 potassium efflux system protein KefA
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_bf_inoc_scaffold_69_curated_119
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144861..145784)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361D44F
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:EIL93599.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Inosine-uridine nucleoside N-ribohydrolase
SCNpilot_bf_inoc_scaffold_69_curated_120
unknown

Not on your lists

comp(146086..146673)
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying items 91-120 of 272 in total

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