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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 17301-17350 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_997 22 11923 bp 45.07 6.60 82.98
sw_10_scaffold_1173 22 13724 bp 44.52 7.18 91.04
sw_10_scaffold_934 22 12042 bp 62.83 24.65 93.90
sw_10_scaffold_497
Order: Natrialbales (50%)
22 18230 bp 65.71 14.54 89.75
sw_10_scaffold_164 22 22904 bp 50.43 12.58 77.24
sw_10_scaffold_261 22 28662 bp 66.45 21.31 85.85
sw_10_scaffold_525
Genus: Halococcus (50%)
22 18539 bp 60.91 22.90 69.89
sw_10_scaffold_779 22 19059 bp 54.03 14.27 81.03
sw_10_scaffold_461 23 11619 bp 39.75 61.37 78.53
sw_10_scaffold_602 23 22240 bp 55.77 9.94 89.20
sw_10_scaffold_1697
Order: Natrialbales (60.87%)
23 18848 bp 65.75 35.29 82.32
sw_10_scaffold_1977 23 17531 bp 35.19 6.81 89.89
sw_10_scaffold_191
Class: Halobacteria (52.17%)
23 19699 bp 55.20 35.56 86.72
sw_10_scaffold_584 23 12553 bp 44.71 10.28 81.47
sw_10_scaffold_449 23 13025 bp 34.34 9.82 88.01
sw_10_scaffold_308
Class: Halobacteria (60.87%)
23 26150 bp 59.20 26.60 86.44
sw_10_scaffold_187 23 21158 bp 65.95 26.23 77.86
sw_10_scaffold_2079
Class: Halobacteria (56.52%)
23 13671 bp 60.48 20.27 75.48
sw_10_scaffold_174
Phylum: Bacteroidetes (58.33%)
24 29622 bp 63.82 18.52 86.93
sw_10_scaffold_598 24 16630 bp 50.97 7.76 76.63
sw_10_scaffold_344
Order: Haloferacales (58.33%)
24 23804 bp 66.48 32.21 85.18
sw_10_scaffold_417 24 11554 bp 38.84 63.62 77.86
sw_10_scaffold_426
Order: Natrialbales (54.17%)
24 24213 bp 65.45 25.04 89.30
sw_10_scaffold_805 25 13530 bp 63.22 12.80 91.73
sw_10_scaffold_440
Class: Halobacteria (92%)
25 21421 bp 60.69 15.30 87.49
sw_10_scaffold_103
Species: Halococcus saccharolyticus (52%)
25 28634 bp 59.15 17.97 90.38
sw_10_scaffold_143
Domain: Archaea (60%)
25 21982 bp 56.63 16.12 82.92
sw_10_scaffold_208 25 23513 bp 47.71 9.21 82.00
sw_10_scaffold_202 26 18415 bp 38.46 66.09 91.90
sw_10_scaffold_1266 26 19653 bp 61.58 13.08 79.42
sw_10_scaffold_529 27 12433 bp 55.83 10.31 72.94
sw_10_scaffold_1049
Class: Halobacteria (92.59%)
27 24701 bp 60.09 39.14 85.53
sw_10_scaffold_1004
Order: Halobacteriales (59.26%)
27 25274 bp 64.35 15.78 90.73
sw_10_scaffold_1633 27 18066 bp 61.86 10.05 84.03
sw_10_scaffold_284 27 21365 bp 60.75 16.94 81.75
sw_10_scaffold_413 28 12494 bp 40.10 56.33 79.43
sw_10_scaffold_466
Class: Halobacteria (53.57%)
28 22360 bp 65.73 15.14 85.93
sw_10_scaffold_790
Phylum: Euryarchaeota (50%)
28 22244 bp 51.57 8.89 80.42
sw_10_scaffold_1426 28 16727 bp 63.88 14.78 87.40
sw_10_scaffold_364 28 19515 bp 53.42 17.22 95.63
sw_10_scaffold_843
Class: Halobacteria (89.29%)
28 27870 bp 65.70 13.32 85.48
sw_10_scaffold_200
Class: Halobacteria (82.76%)
29 24164 bp 67.94 21.66 92.90
sw_10_scaffold_242
Genus: Halococcus (55.17%)
29 29179 bp 62.34 22.25 93.15
sw_10_scaffold_412 29 14245 bp 34.27 7.86 73.37
sw_10_scaffold_643 30 25143 bp 47.00 10.13 90.01
sw_10_scaffold_533 30 16639 bp 49.23 9.71 85.17
sw_10_scaffold_796
Class: Halobacteria (80%)
30 29631 bp 66.74 13.24 86.11
sw_10_scaffold_474 30 20342 bp 41.73 57.76 91.69
sw_10_scaffold_221
Order: Halobacteriales (54.84%)
31 37112 bp 58.65 20.34 87.51
sw_10_scaffold_888
Class: Halobacteria (65.63%)
32 32721 bp 62.79 12.73 88.35
Displaying items 17301-17350 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.