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SW_12_Halobacteriales_68_16

In projects: SW_12  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 51-100 of 117 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_12_scaffold_6123
Class: Halobacteria (75%)
4 3521 bp 67.17 15.76 82.73
sw_12_scaffold_1234
Order: Halobacteriales (75%)
12 11081 bp 69.68 15.75 81.65
sw_12_scaffold_3086
Species: Halosimplex carlsbadense (91.67%)
12 6691 bp 67.69 15.72 93.75
sw_12_scaffold_4253
Species: Halosimplex carlsbadense (75%)
4 3034 bp 67.80 15.72 97.69
sw_12_scaffold_4164
Species: Halosimplex carlsbadense (66.67%)
3 3075 bp 66.28 15.71 80.49
sw_12_scaffold_4457
Order: Natrialbales (80%)
5 4060 bp 69.29 15.59 88.82
sw_12_scaffold_5344
Class: Halobacteria (69.23%)
13 11294 bp 66.95 15.56 87.53
sw_12_scaffold_2606
Order: Halobacteriales (60%)
5 4029 bp 68.11 15.44 91.81
sw_12_scaffold_8848
Species: Halosimplex carlsbadense (80%)
5 3568 bp 66.93 15.44 95.35
sw_12_scaffold_5252
Order: Halobacteriales (50%)
8 4149 bp 68.67 15.35 73.10
sw_12_scaffold_8545
Species: Halosimplex carlsbadense (100%)
3 3009 bp 67.80 15.22 91.03
sw_12_scaffold_2882
Order: Halobacteriales (66.67%)
6 5172 bp 68.50 15.22 83.53
sw_12_scaffold_7162
Class: Halobacteria (72.73%)
11 6662 bp 68.87 15.21 88.17
sw_12_scaffold_16232
Genus: Haloarcula (66.67%)
6 3360 bp 68.42 15.12 78.13
sw_12_scaffold_4713
Order: Halobacteriales (53.85%)
13 10932 bp 69.52 15.06 83.32
sw_12_scaffold_5273
Order: Halobacteriales (80%)
5 4463 bp 66.55 15.03 83.69
sw_12_scaffold_6617
Order: Halobacteriales (60%)
5 4224 bp 68.32 15.01 81.11
sw_12_scaffold_3296
Order: Natrialbales (66.67%)
3 3533 bp 69.80 15.00 96.21
sw_12_scaffold_2827
Class: Halobacteria (57.14%)
7 9557 bp 67.25 14.98 86.89
sw_12_scaffold_12416
Order: Halobacteriales (60%)
5 3374 bp 69.95 14.97 83.22
sw_12_scaffold_624
Class: Halobacteria (92.31%)
13 13127 bp 68.64 14.95 71.79
sw_12_scaffold_2653
Order: Halobacteriales (57.14%)
7 3994 bp 68.35 14.92 90.89
sw_12_scaffold_5204
Class: Halobacteria (85.71%)
7 6789 bp 70.26 14.91 77.24
sw_12_scaffold_2270
Order: Natrialbales (57.14%)
7 5646 bp 68.90 14.79 90.17
sw_12_scaffold_9330
Order: Halobacteriales (50%)
6 3880 bp 67.35 14.79 84.74
sw_12_scaffold_4910
Order: Halobacteriales (57.14%)
7 5746 bp 67.39 14.78 81.66
sw_12_scaffold_3542
Order: Natrialbales (60%)
5 4700 bp 69.45 14.77 79.53
sw_12_scaffold_4193
Species: Halosimplex carlsbadense (100%)
3 3063 bp 67.19 14.76 91.58
sw_12_scaffold_4096
Order: Natrialbales (50%)
8 5686 bp 68.99 14.65 71.97
sw_12_scaffold_6375
Class: Halobacteria (100%)
5 5433 bp 69.15 14.63 84.59
sw_12_scaffold_5463
Species: Halosimplex carlsbadense (75%)
4 3192 bp 68.48 14.63 94.45
sw_12_scaffold_2449
Class: Halobacteria (76.92%)
13 10575 bp 67.81 14.48 82.47
sw_12_scaffold_9758
Order: Haloferacales (66.67%)
3 3590 bp 69.11 14.48 84.65
sw_12_scaffold_6308
Class: Halobacteria (60%)
5 3643 bp 68.54 14.47 87.46
sw_12_scaffold_3865
Order: Halobacteriales (60%)
10 10343 bp 68.17 14.44 76.78
sw_12_scaffold_1175
Class: Halobacteria (75%)
8 6106 bp 66.84 14.43 88.04
sw_12_scaffold_5925
Order: Natrialbales (50%)
4 3305 bp 69.59 14.40 94.13
sw_12_scaffold_7493
Order: Halobacteriales (85.71%)
7 3133 bp 68.91 14.40 89.88
sw_12_scaffold_6461
Class: Halobacteria (100%)
3 3049 bp 68.19 14.33 72.22
sw_12_scaffold_3889
Class: Halobacteria (80%)
5 4578 bp 66.82 14.20 86.44
sw_12_scaffold_2192
Class: Halobacteria (57.14%)
7 8407 bp 66.31 14.17 93.96
sw_12_scaffold_13108
Species: Halosimplex carlsbadense (66.67%)
3 3666 bp 70.16 14.16 87.73
sw_12_scaffold_3478
Order: Halobacteriales (100%)
5 3423 bp 69.73 14.14 95.62
sw_12_scaffold_3510
Species: Halosimplex carlsbadense (50%)
4 4484 bp 67.06 14.12 92.86
sw_12_scaffold_3700
Order: Halobacteriales (50%)
4 3296 bp 69.66 14.05 99.12
sw_12_scaffold_6451
Species: Halorubrum kocurii (100%)
2 3429 bp 67.42 14.03 49.17
sw_12_scaffold_8441
Order: Halobacteriales (50%)
4 3368 bp 69.86 13.98 86.05
sw_12_scaffold_6063
Order: Halobacteriales (60%)
10 6364 bp 67.52 13.92 85.75
sw_12_scaffold_17700
Class: Halobacteria (50%)
6 4196 bp 69.42 13.82 75.14
sw_12_scaffold_3502
Order: Halobacteriales (53.33%)
15 11658 bp 67.48 13.74 76.97
Displaying items 51-100 of 117 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.