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ACD24_36

Alias: ACD24_128773.4462.5

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD24_36_1

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1..204
DNA (204bp) protein (68aa)
hypothetical protein
YebC-like (db=superfamily db_id=SSF75625 from=1 to=65 evalue=3.9e-14 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
DUF28 (db=HMMPfam db_id=PF01709 from=1 to=57 evalue=5.7e-11 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12532 from=1 to=67 evalue=8.7e-07 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD24_36_2

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215..997
DNA (783bp) protein (261aa)
seg (db=Seg db_id=seg from=181 to=193)
seg (db=Seg db_id=seg from=125 to=139)
seg (db=Seg db_id=seg from=113 to=124)
seg (db=Seg db_id=seg from=59 to=66)
ACD24_36_3
GWC1_OP11_37_12b, Microgenomates, Bacteria

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1803..2342
DNA (540bp) protein (180aa)
seg (db=Seg db_id=seg from=126 to=139)
Uncharacterized protein {ECO:0000313|EMBL:KKQ24555.1}; TaxID=1618510 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_37_12b.;"
ACD24_36_4
GWB1_OP11_38_8b, Woesebacteria, Microgenomates, Bacteria

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2476..3477
DNA (1002bp) protein (334aa)
hypothetical protein
Integrase family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIT7_9FIRM (db=UNIREF evalue=5.0e-39 bit_score=165.0 identity=38.17 coverage=87.7245508982036)
seg (db=Seg db_id=seg from=191 to=204)
seg (db=Seg db_id=seg from=170 to=181)
ACD24_36_5

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comp(3478..3711)
DNA (234bp) protein (78aa)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=36 to=62 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=20 to=63 evalue=2.3e-13 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=2 to=68 evalue=1.3e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=2 to=64 evalue=2.0e-07 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD24_36_6

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3865..4353
DNA (489bp) protein (163aa)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=4 to=158 evalue=5.8e-08)
Uncharacterized protein {ECO:0000313|EMBL:EKD96445.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD24_36_7

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comp(4359..4496)
DNA (138bp) protein (46aa)
DNA_gyraseA_C (db=HMMPfam db_id=PF03989 from=2 to=27 evalue=6.3e-06 interpro_id=IPR006691 interpro_description=DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Molecular Function: ATP binding (GO:0005524), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
Uncharacterized protein {ECO:0000313|EMBL:EKD96446.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

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