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ACD7_40

Alias: ACD7_148.10174.76

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD7_40_1

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1..1977
DNA (1977bp) protein (659aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=212 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=270 to=287)
transmembrane_regions (db=TMHMM db_id=tmhmm from=292 to=311)
ACD7_40_2

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1983..2333
DNA (351bp) protein (117aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=25)
seg (db=Seg db_id=seg from=6 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKE21865.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_40_3

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2350..2778
DNA (429bp) protein (143aa)
peptide deformylase
Peptide deformylase (db=superfamily db_id=SSF56420 from=1 to=142 evalue=1.9e-50 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Pep_deformylase (db=HMMPfam db_id=PF01327 from=2 to=142 evalue=1.2e-49 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
POLYPEPTIDE DEFORMYLASE (db=HMMPanther db_id=PTHR10458 from=4 to=142 evalue=5.3e-45 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD7_40_4

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2894..3856
DNA (963bp) protein (321aa)
methionyl-tRNA formyltransferase
GART (db=PatternScan db_id=PS00373 from=137 to=160 evalue=0.0 interpro_id=IPR001555 interpro_description=Phosphoribosylglycinamide formyltransferase, active site GO=Molecular Function: methyltransferase activity (GO:0008168))
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=7 to=318 evalue=7.0e-67 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
Formyltransferase (db=superfamily db_id=SSF53328 from=7 to=211 evalue=1.9e-56 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD7_40_5

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3860..4681
DNA (822bp) protein (274aa)
redox protein, regulator of disulfide bond formation fused to Rhodanese-like domain
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
RHODANESE_1 (db=PatternScan db_id=PS00380 from=200 to=211 evalue=0.0 interpro_id=IPR001307 interpro_description=Thiosulphate sulfurtransferase, conserved site GO=Molecular Function: thiosulfate sulfurtransferase activity (GO:0004792), Biological Process: sulfate transport (GO:0008272))
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=168 to=273 evalue=8.1e-23 interpro_id=IPR001763 interpro_description=Rhodanese-like)
ACD7_40_6

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comp(5107..5388)
DNA (282bp) protein (94aa)
groES; 10 kDa chaperonin
Co-chaperonin GroES n=1 Tax=unidentified eubacterium SCB49 RepID=A6EMX1_9BACT (db=UNIREF evalue=4.0e-14 bit_score=80.1 identity=47.87 coverage=93.6170212765958)
no description (db=HMMSmart db_id=SM00883 from=2 to=91 evalue=5.5e-26 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
Cpn10 (db=HMMPfam db_id=PF00166 from=2 to=91 evalue=7.1e-22 interpro_id=IPR020818 interpro_description=Chaperonin Cpn10 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
ACD7_40_7

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comp(5496..7604)
DNA (2109bp) protein (703aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH (db=UNIREF evalue=3.0e-132 bit_score=476.0 identity=55.45 coverage=59.1749644381223)
hypothetical protein
hypothetical protein
coiled-coil (db=Coil db_id=coil from=599 to=624 evalue=NA)
ACD7_40_8

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comp(7609..8886)
DNA (1278bp) protein (426aa)
hypothetical protein cdiviTM7_01505 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22CB (db=UNIREF evalue=5.0e-08 bit_score=62.8 identity=26.27 coverage=63.6150234741784)
seg (db=Seg db_id=seg from=362 to=377)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE21862.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD7_40_9

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comp(8948..10012)
DNA (1065bp) protein (355aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=10)
seg (db=Seg db_id=seg from=133 to=141)
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=8 to=80 evalue=1.0e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Displaying 9 items

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