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ACD2_13

Alias: ACD2_2542.155524.63

Search features with annotation key words

Displaying items 31-60 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_13_31
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(32862..33368)
DNA (507bp) protein (169aa)
seg (db=Seg db_id=seg from=47 to=65)
seg 47..65 Tax=ACD2
ACD2_13_32
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(33762..33923)
DNA (162bp) protein (54aa)
seg (db=Seg db_id=seg from=4 to=17)
seg 4..17 Tax=ACD2
ACD2_13_33
unknown

Not on your lists


33966..34181
DNA (216bp) protein (72aa)
50S ribosomal protein L31
50S ribosomal protein L31 n=2 Tax=Mobiluncus mulieris RepID=D0YVA7_9ACTO (db=UNIREF evalue=1.0e-15 bit_score=85.1 identity=61.19 coverage=88.8888888888889)
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=66 evalue=1.6e-24 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=63 evalue=6.5e-24 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD2_13_34
ACD2, Gracilibacteria, Bacteria

Not on your lists

34661..34975
DNA (315bp) protein (105aa)
seg (db=Seg db_id=seg from=26 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
transmembrane_regions 46..68 Tax=ACD2
ACD2_13_35
unknown

Not on your lists

comp(35276..38209)
DNA (2934bp) protein (978aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT (db=UNIREF evalue=2.0e-102 bit_score=377.0 identity=40.0 coverage=47.9550102249489)
seg (db=Seg db_id=seg from=87 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
ACD2_13_36
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(40031..41446)
DNA (1416bp) protein (472aa)
seg (db=Seg db_id=seg from=10 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=131 evalue=1.2e-18)
Concanavalin A-like lectins/glucanases (db=superfamily db_id=SSF49899 from=234 to=469 evalue=1.9e-13 interpro_id=IPR008985 interpro_description=Concanavalin A-like lectin/glucanase)
ACD2_13_37
ACD2, Gracilibacteria, Bacteria

Not on your lists

43501..44127
DNA (627bp) protein (209aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=136 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD2
ACD2_13_38
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(44053..45354)
DNA (1302bp) protein (434aa)
seg (db=Seg db_id=seg from=5 to=13)
seg 5..13 Tax=ACD2
ACD2_13_39

Not on your lists

46521..47714
DNA (1194bp) protein (398aa)
Peptidase M23 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF68_9FIRM (db=UNIREF evalue=4.0e-10 bit_score=69.7 identity=28.48 coverage=37.4371859296482)
Peptidase M23 {ECO:0000313|EMBL:EKE29466.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD2_13_40
ACD2, Gracilibacteria, Bacteria

Not on your lists

47720..48370
DNA (651bp) protein (217aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
DUF1287 (db=HMMPfam db_id=PF06940 from=54 to=215 evalue=1.3e-32 interpro_id=IPR009706 interpro_description=Protein of unknown function DUF1287)
Q3AA40_CARHY_Q3AA40; (db=BlastProDom db_id=PD357862 from=54 to=215 evalue=1.0e-31 interpro_id=IPR009706 interpro_description=Protein of unknown function DUF1287)
ACD2_13_41
ACD2, Gracilibacteria, Bacteria

Not on your lists

48676..48891
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=33 to=46)
seg 33..46 Tax=ACD2
ACD2_13_42
ACD2, Gracilibacteria, Bacteria

Not on your lists

48891..49223
DNA (333bp) protein (111aa)
48891..49223 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_13_43
ACD2, Gracilibacteria, Bacteria

Not on your lists

50034..50507
DNA (474bp) protein (158aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=120)
ACD2_13_44
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(50488..51807)
DNA (1320bp) protein (440aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=64)
seg (db=Seg db_id=seg from=286 to=303)
seg (db=Seg db_id=seg from=83 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=96)
ACD2_13_45
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(51817..53121)
DNA (1305bp) protein (435aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
seg (db=Seg db_id=seg from=183 to=194)
seg (db=Seg db_id=seg from=46 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=91)
ACD2_13_46
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(53133..54539)
DNA (1407bp) protein (469aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=67)
seg (db=Seg db_id=seg from=322 to=341)
seg (db=Seg db_id=seg from=81 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
ACD2_13_47
unknown

Not on your lists

comp(54652..55221)
DNA (570bp) protein (190aa)
Putative lemA protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB40_9SPHI (db=UNIREF evalue=3.0e-42 bit_score=174.0 identity=53.57 coverage=87.3684210526316)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=20)
ACD2_13_48
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(55245..55568)
DNA (324bp) protein (108aa)
55245..55568 - (rbs_motif=TAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_13_49

Not on your lists

comp(55570..57507)
DNA (1938bp) protein (646aa)
Type IV secretory pathway VirB4 components-like protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS14_9BACT (db=UNIREF evalue=7.0e-152 bit_score=541.0 identity=47.71 coverage=86.9969040247678)
Type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein
ACD2_13_50
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(57623..58828)
DNA (1206bp) protein (402aa)
hypothetical protein (db=KEGG evalue=2.0e-26 bit_score=123.0 identity=28.9 coverage=62.6865671641791)
transmembrane_regions (db=TMHMM db_id=tmhmm from=190 to=212)
coiled-coil (db=Coil db_id=coil from=119 to=140 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
ACD2_13_51
ACD2, Gracilibacteria, Bacteria

Not on your lists

58995..59456
DNA (462bp) protein (154aa)
single-strand binding protein
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=2 to=153 evalue=1.0e-40 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=153 evalue=8.2e-40 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=4 to=106 evalue=1.3e-36 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
ACD2_13_52
ACD2, Gracilibacteria, Bacteria

Not on your lists

60622..60912
DNA (291bp) protein (97aa)
seg (db=Seg db_id=seg from=73 to=84)
seg 73..84 Tax=ACD2
ACD2_13_53

Not on your lists

comp(61012..61713)
DNA (702bp) protein (234aa)
hypothetical protein
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=15 to=36 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Biological Process: oxygen and reactive oxygen species metabolic process (GO:0006800), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NrdG2: anaerobic ribonucleoside-triphosphate (db=HMMTigr db_id=TIGR02495 from=2 to=196 evalue=9.8e-49 interpro_id=IPR012840 interpro_description=Ribonucleoside-triphosphate reductase, anaerobic-like)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=13 to=178 evalue=5.0e-14)
activates pyruvate formate lyase Jill Banfield (11/15/12)
ACD2_13_54
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(61713..61982)
DNA (270bp) protein (90aa)
61713..61982 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_13_55
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(62226..62393)
DNA (168bp) protein (56aa)
hypothetical protein
hypothetical protein alias=ACD2_C00013G00055,ACD2_2542.155524.63G0055,ACD2_2542.155524.63_55 id=34385 tax=ACD2 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_13_56

Not on your lists

comp(62480..64753)
DNA (2274bp) protein (758aa)
hypothetical protein
hypothetical protein
hypothetical protein
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBJ2_KANKD (db=UNIREF evalue=0.0 bit_score=808.0 identity=56.41 coverage=86.1477572559367)
ACD2_13_57
ACD2, Gracilibacteria, Bacteria

Not on your lists

65037..65774
DNA (738bp) protein (246aa)
seg (db=Seg db_id=seg from=90 to=103)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=17 to=203 evalue=5.7e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=40 to=161 evalue=4.4e-11)
Methyltransf_12 (db=HMMPfam db_id=PF08242 from=49 to=138 evalue=7.2e-10 interpro_id=IPR013217 interpro_description=Methyltransferase type 12)
ACD2_13_58
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(65775..66776)
DNA (1002bp) protein (334aa)
S-layer domain protein (db=KEGG evalue=5.0e-13 bit_score=79.0 identity=28.99 coverage=56.2874251497006)
S-layer domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D478_PAESJ (db=UNIREF evalue=5.0e-13 bit_score=79.0 identity=28.99 coverage=56.2874251497006)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
SLH (db=HMMPfam db_id=PF00395 from=154 to=195 evalue=6.3e-09 interpro_id=IPR001119 interpro_description=S-layer homology domain)
ACD2_13_59
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(66793..68229)
DNA (1437bp) protein (479aa)
seg (db=Seg db_id=seg from=138 to=152)
seg 138..152 Tax=ACD2
ACD2_13_60
ACD2, Gracilibacteria, Bacteria

Not on your lists

68358..68810
DNA (453bp) protein (151aa)
Ribosomal RNA large subunit methyltransferase H
seg (db=Seg db_id=seg from=27 to=38)
seg (db=Seg db_id=seg from=48 to=61)
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=149 evalue=9.0e-40)
Displaying items 31-60 of 148 in total

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