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ACD2_13

Alias: ACD2_2542.155524.63

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Displaying items 91-120 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_13_91
ACD2, Gracilibacteria, Bacteria

Not on your lists

97115..97276
DNA (162bp) protein (54aa)
97115..97276 + (rbs_motif=TAA rbs_spacer=15bp)
hypothetical protein Tax=ACD2
ACD2_13_92
ACD2, Gracilibacteria, Bacteria

Not on your lists

97350..97904
DNA (555bp) protein (185aa)
seg (db=Seg db_id=seg from=14 to=26)
seg 14..26 Tax=ACD2
ACD2_13_93
ACD2, Gracilibacteria, Bacteria

Not on your lists

97873..98049
DNA (177bp) protein (59aa)
coiled-coil (db=Coil db_id=coil from=30 to=51 evalue=NA)
coiled-coil 30..51 Tax=ACD2
ACD2_13_94
ACD2, Gracilibacteria, Bacteria

Not on your lists

98154..98426
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=40 to=56)
seg (db=Seg db_id=seg from=14 to=26)
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
coiled-coil 32..53 Tax=ACD2
ACD2_13_95
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(98518..98823)
DNA (306bp) protein (102aa)
98518..98823 - (rbs_motif=TAAAAA rbs_spacer=3bp)
hypothetical protein Tax=ACD2
ACD2_13_96
ACD2, Gracilibacteria, Bacteria

Not on your lists

98844..99932
DNA (1089bp) protein (363aa)
coiled-coil (db=Coil db_id=coil from=323 to=344 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=100 to=112)
seg (db=Seg db_id=seg from=206 to=219)
ACD2_13_97
unknown

Not on your lists

100894..101427
DNA (534bp) protein (178aa)
Peptidyl-tRNA hydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4X1_9FIRM (db=UNIREF evalue=1.0e-31 bit_score=138.0 identity=42.77 coverage=95.5056179775281)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
seg (db=Seg db_id=seg from=83 to=94)
PEPTIDYL-TRNA HYDROLASE (db=HMMPanther db_id=PTHR17224 from=1 to=165 evalue=7.9e-41 interpro_id=IPR001328 interpro_description=Peptidyl-tRNA hydrolase GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
ACD2_13_98
ACD2, Gracilibacteria, Bacteria

Not on your lists

101440..101757
DNA (318bp) protein (106aa)
101440..101757 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_13_99
ACD2, Gracilibacteria, Bacteria

Not on your lists

101768..102157
DNA (390bp) protein (130aa)
seg (db=Seg db_id=seg from=83 to=98)
coiled-coil (db=Coil db_id=coil from=49 to=80 evalue=NA)
coiled-coil 49..80 Tax=ACD2
ACD2_13_100
ACD2, Gracilibacteria, Bacteria

Not on your lists

102144..102392
DNA (249bp) protein (83aa)
102144..102392 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_13_101

Not on your lists

102417..104108
DNA (1692bp) protein (564aa)
histone acetyltransferase, ELP3 family
HISTONE ACETYLTRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11135 from=85 to=562 evalue=5.5e-101)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=94 to=371 evalue=3.0e-23)
no description (db=HMMSmart db_id=SM00729 from=84 to=364 evalue=7.7e-22 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB)
ACD2_13_102
ACD2, Gracilibacteria, Bacteria

Not on your lists

104098..104826
DNA (729bp) protein (243aa)
hypothetical protein; K07053 (db=KEGG evalue=6.0e-08 bit_score=61.2 identity=25.0 coverage=86.8312757201646)
seg (db=Seg db_id=seg from=62 to=73)
PHP domain-like (db=superfamily db_id=SSF89550 from=1 to=214 evalue=2.1e-20 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
hypothetical protein; K07053 alias=ACD2_C00013G00102,ACD2_2542.155524.63G0102,ACD2_2542.155524.63_102 id=34393 tax=ACD2 species=Methanocorpusculum labreanum genus=Methanocorpusculum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=BD1-5 organism_desc=BD1-5
ACD2_13_103
unknown

Not on your lists

comp(104792..106054)
DNA (1263bp) protein (421aa)
Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQN9_9GAMM (db=UNIREF evalue=2.0e-21 bit_score=107.0 identity=35.75 coverage=40.3800475059382)
diguanylate cyclase
seg (db=Seg db_id=seg from=85 to=96)
seg (db=Seg db_id=seg from=362 to=373)
ACD2_13_104
ACD2, Gracilibacteria, Bacteria

Not on your lists

106403..107614
DNA (1212bp) protein (404aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=312 to=334)
transmembrane_regions (db=TMHMM db_id=tmhmm from=338 to=355)
transmembrane_regions (db=TMHMM db_id=tmhmm from=362 to=384)
seg (db=Seg db_id=seg from=315 to=331)
ACD2_13_105
ACD2, Gracilibacteria, Bacteria

Not on your lists

107759..109540
DNA (1782bp) protein (594aa)
protein export protein SecD
transmembrane_regions (db=TMHMM db_id=tmhmm from=525 to=547)
seg (db=Seg db_id=seg from=474 to=485)
seg (db=Seg db_id=seg from=447 to=460)
ACD2_13_106
ACD2, Gracilibacteria, Bacteria

Not on your lists

109543..109716
DNA (174bp) protein (58aa)
seg (db=Seg db_id=seg from=16 to=26)
seg 16..26 Tax=ACD2
ACD2_13_107
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(109767..111263)
DNA (1497bp) protein (499aa)
109767..111263 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_13_108
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(111275..111490)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=17 to=33)
seg 17..33 Tax=ACD2
ACD2_13_109
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(111494..111847)
DNA (354bp) protein (118aa)
111494..111847 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_13_110
unknown

Not on your lists

111969..113168
DNA (1200bp) protein (400aa)
Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT (db=UNIREF evalue=4.0e-114 bit_score=415.0 identity=49.5 coverage=99.25)
Thermophilic metalloprotease (M29) superfamily
coiled-coil (db=Coil db_id=coil from=191 to=212 evalue=NA)
ACD2_13_111
unknown

Not on your lists

113192..114433
DNA (1242bp) protein (414aa)
hypothetical protein
Hydrolase (HAD superfamily) protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CJV4_9BACI (db=UNIREF evalue=3.0e-12 bit_score=76.6 identity=30.22 coverage=41.7874396135266)
seg (db=Seg db_id=seg from=210 to=220)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=213 to=405 evalue=1.3e-22)
ACD2_13_112
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(114841..115338)
DNA (498bp) protein (166aa)
114841..115338 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_13_113
unknown

Not on your lists

comp(115379..116425)
DNA (1047bp) protein (349aa)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3763D (db=UNIREF evalue=9.0e-61 bit_score=237.0 identity=42.57 coverage=95.4154727793696)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Aldolase (db=superfamily db_id=SSF51569 from=2 to=346 evalue=8.1e-71)
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=3 to=348 evalue=1.7e-68 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
First step, from PEP, in phenylalanine, tyrosine, tryptophan biosyn Jill Banfield (11/15/12)
ACD2_13_114
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(116892..118004)
DNA (1113bp) protein (371aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
seg (db=Seg db_id=seg from=35 to=56)
seg (db=Seg db_id=seg from=70 to=92)
ACD2_13_115
ACD2, Gracilibacteria, Bacteria

Not on your lists

118146..118370
DNA (225bp) protein (75aa)
118146..118370 + (rbs_motif=TAAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_13_116
unknown

Not on your lists

118552..118899
DNA (348bp) protein (116aa)
S23 ribosomal protein n=1 Tax=Geobacter sp. M18 RepID=C6MPV2_9DELT (db=UNIREF evalue=1.0e-15 bit_score=85.5 identity=38.26 coverage=98.2758620689655)
S23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=5 to=109 evalue=1.4e-21 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein n=1 Tax=Geobacter sp. M18 RepID=C6MPV2_9DELT Tax=ACD2
ACD2_13_117
ACD2, Gracilibacteria, Bacteria

Not on your lists


118924..119910
DNA (987bp) protein (329aa)
RecA protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GSD4_SPHAL (db=UNIREF evalue=7.0e-114 bit_score=414.0 identity=62.04 coverage=96.9604863221885)
recA; multifunctional SOS repair factor
recA; multifunctional SOS repair factor
recA; multifunctional SOS repair factor
ACD2_13_118
ACD2, Gracilibacteria, Bacteria

Not on your lists

119990..120328
DNA (339bp) protein (113aa)
seg (db=Seg db_id=seg from=26 to=37)
seg 26..37 Tax=ACD2
ACD2_13_119
ACD2, Gracilibacteria, Bacteria

Not on your lists

120328..121002
DNA (675bp) protein (225aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Ferredoxin reductase-like, C-terminal NADP-linked domain (db=superfamily db_id=SSF52343 from=95 to=224 evalue=1.5e-17)
no description (db=Gene3D db_id=G3DSA:3.40.50.80 from=92 to=224 evalue=2.7e-13)
NAD_binding_1 (db=HMMPfam db_id=PF00175 from=112 to=206 evalue=1.1e-07 interpro_id=IPR001433 interpro_description=Oxidoreductase FAD/NAD(P)-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD2_13_120
ACD2, Gracilibacteria, Bacteria

Not on your lists

121022..121579
DNA (558bp) protein (186aa)
translation elongation factor P
no description (db=HMMSmart db_id=SM00841 from=129 to=184 evalue=1.7e-18 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
Elong-fact-P_C (db=HMMPfam db_id=PF09285 from=129 to=184 evalue=2.1e-17 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=128 to=185 evalue=1.9e-15 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
Displaying items 91-120 of 148 in total

View Taxonomy