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ACD2_13

Alias: ACD2_2542.155524.63

Search features with annotation key words

Displaying items 121-148 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_13_121
unknown

Not on your lists

121712..124159
DNA (2448bp) protein (816aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT (db=UNIREF evalue=9.0e-135 bit_score=484.0 identity=34.22 coverage=98.6519607843137)
seg (db=Seg db_id=seg from=69 to=80)
seg (db=Seg db_id=seg from=241 to=262)
ACD2_13_122
ACD2, Gracilibacteria, Bacteria

Not on your lists

124162..125100
DNA (939bp) protein (313aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions 7..26 Tax=ACD2
ACD2_13_123
unknown

Not on your lists

comp(125105..126064)
DNA (960bp) protein (320aa)
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEP1_9SPHN (db=UNIREF evalue=2.0e-35 bit_score=153.0 identity=34.14 coverage=74.6875)
seg (db=Seg db_id=seg from=17 to=30)
seg (db=Seg db_id=seg from=33 to=46)
ACD2_13_124
ACD2, Gracilibacteria, Bacteria

Not on your lists

126194..127084
DNA (891bp) protein (297aa)
band 7 protein
seg (db=Seg db_id=seg from=3 to=20)
Band_7 (db=HMMPfam db_id=PF01145 from=19 to=189 evalue=1.4e-20 interpro_id=IPR001107 interpro_description=Band 7 protein)
STOMATIN-RELATED (db=HMMPanther db_id=PTHR10264 from=1 to=286 evalue=2.0e-20)
ACD2_13_125
ACD2, Gracilibacteria, Bacteria

Not on your lists

127097..127735
DNA (639bp) protein (213aa)
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.170)
seg (db=Seg db_id=seg from=173 to=184)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=4 to=211 evalue=1.7e-37)
GidB (db=HMMPfam db_id=PF02527 from=19 to=178 evalue=1.3e-32 interpro_id=IPR003682 interpro_description=rRNA small subunit methyltransferase G GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
ACD2_13_126
ACD2, Gracilibacteria, Bacteria

Not on your lists

127828..128907
DNA (1080bp) protein (360aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=180 to=191)
transmembrane_regions 5..22 Tax=ACD2
ACD2_13_127
ACD2, Gracilibacteria, Bacteria

Not on your lists

128926..131427
DNA (2502bp) protein (834aa)
128926..131427 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_13_128
ACD2, Gracilibacteria, Bacteria

Not on your lists

131570..133651
DNA (2082bp) protein (694aa)
lipoprotein
coiled-coil (db=Coil db_id=coil from=83 to=167 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=291 to=503 evalue=1.5e-16 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD2_13_129
ACD2, Gracilibacteria, Bacteria

Not on your lists

134218..134895
DNA (678bp) protein (226aa)
coiled-coil (db=Coil db_id=coil from=175 to=210 evalue=NA)
seg (db=Seg db_id=seg from=9 to=20)
seg (db=Seg db_id=seg from=93 to=106)
coiled-coil 175..210 Tax=ACD2
ACD2_13_130
ACD2, Gracilibacteria, Bacteria

Not on your lists

134915..135973
DNA (1059bp) protein (353aa)
Twitching motility protein
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=113 to=352 evalue=5.6e-49)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=240 evalue=3.6e-44)
GSPII_E (db=HMMPfam db_id=PF00437 from=15 to=259 evalue=2.7e-33 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
ACD2_13_131
ACD2, Gracilibacteria, Bacteria

Not on your lists

135982..136965
DNA (984bp) protein (328aa)
seg (db=Seg db_id=seg from=22 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=299 to=318)
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=286)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
ACD2_13_132
ACD2, Gracilibacteria, Bacteria

Not on your lists

136983..137405
DNA (423bp) protein (141aa)
seg (db=Seg db_id=seg from=86 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD2_13_133
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(138704..139072)
DNA (369bp) protein (123aa)
138704..139072 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_13_134
ACD2, Gracilibacteria, Bacteria

Not on your lists


comp(139085..141241)
DNA (2157bp) protein (719aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermincola sp. JR RepID=D5XF21_9FIRM (db=UNIREF evalue=8.0e-143 bit_score=511.0 identity=42.57 coverage=96.9401947148818)
ACD2_13_135
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(141489..142532)
DNA (1044bp) protein (348aa)
coiled-coil (db=Coil db_id=coil from=25 to=53 evalue=NA)
seg (db=Seg db_id=seg from=2 to=14)
seg (db=Seg db_id=seg from=284 to=294)
coiled-coil 25..53 Tax=ACD2
ACD2_13_136
ACD2, Gracilibacteria, Bacteria

Not on your lists

142642..143334
DNA (693bp) protein (231aa)
N-glycosylase/DNA lyase (EC:4.2.99.18)
DUF1886 (db=HMMPfam db_id=PF09171 from=7 to=222 evalue=2.5e-53 interpro_id=IPR015254 interpro_description=N-glycosylase/DNA lyase-like, archaea)
DNA-glycosylase (db=superfamily db_id=SSF48150 from=1 to=222 evalue=5.7e-44 interpro_id=IPR011257 interpro_description=DNA glycosylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
no description (db=Gene3D db_id=G3DSA:1.10.340.30 from=23 to=171 evalue=2.9e-28)
ACD2_13_137
ACD2, Gracilibacteria, Bacteria

Not on your lists

143395..143829
DNA (435bp) protein (145aa)
seg (db=Seg db_id=seg from=134 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
transmembrane_regions 15..34 Tax=ACD2
ACD2_13_138
ACD2, Gracilibacteria, Bacteria

Not on your lists

143816..144460
DNA (645bp) protein (215aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=9 to=29 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=8 to=31 evalue=5.3e-05 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 21..43 Tax=ACD2
ACD2_13_139
ACD2, Gracilibacteria, Bacteria

Not on your lists

144490..146001
DNA (1512bp) protein (504aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
TSP-1 type 1 repeat (db=superfamily db_id=SSF82895 from=362 to=421 evalue=2.6e-10 interpro_id=IPR000884 interpro_description=Thrombospondin, type 1 repeat)
no description (db=HMMSmart db_id=SM00209 from=370 to=422 evalue=7.7e-05 interpro_id=IPR000884 interpro_description=Thrombospondin, type 1 repeat)
TSP1 (db=ProfileScan db_id=PS50092 from=370 to=422 evalue=8.535 interpro_id=IPR000884 interpro_description=Thrombospondin, type 1 repeat)
ACD2_13_140
ACD2, Gracilibacteria, Bacteria

Not on your lists

146153..146947
DNA (795bp) protein (265aa)
seg (db=Seg db_id=seg from=239 to=252)
seg (db=Seg db_id=seg from=194 to=205)
seg (db=Seg db_id=seg from=161 to=175)
seg (db=Seg db_id=seg from=89 to=102)
ACD2_13_141
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(148182..149402)
DNA (1221bp) protein (407aa)
type II secretion system F domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=160 to=182)
seg (db=Seg db_id=seg from=39 to=58)
ACD2_13_142

Not on your lists

comp(149403..151373)
DNA (1971bp) protein (657aa)
pas/pac sensor protein; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) (db=KEGG evalue=8.0e-13 bit_score=79.3 identity=25.65 coverage=28.158295281583)
seg (db=Seg db_id=seg from=539 to=561)
seg (db=Seg db_id=seg from=83 to=97)
seg (db=Seg db_id=seg from=177 to=196)
ACD2_13_143
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(151390..152628)
DNA (1239bp) protein (413aa)
Type II secretion system protein E n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4E6_JONDD (db=UNIREF evalue=1.0e-88 bit_score=330.0 identity=41.02 coverage=97.8208232445521)
type II secretion system protein E (GspE)
type II secretion system protein E (GspE)
type II secretion system protein E (GspE)
ACD2_13_144
ACD2, Gracilibacteria, Bacteria

Not on your lists

153018..153797
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=14 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=163 to=181)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=12 to=32 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD2_13_145
ACD2, Gracilibacteria, Bacteria

Not on your lists

153854..153997
DNA (144bp) protein (48aa)
153854..153997 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_13_146
ACD2, Gracilibacteria, Bacteria

Not on your lists

154126..154362
DNA (237bp) protein (79aa)
154126..154362 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_13_147
ACD2, Gracilibacteria, Bacteria

Not on your lists

154535..155374
DNA (840bp) protein (280aa)
seg (db=Seg db_id=seg from=177 to=202)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
seg (db=Seg db_id=seg from=13 to=24)
seg (db=Seg db_id=seg from=32 to=65)
ACD2_13_148
ACD2, ACD2, ACD2, ACD2, Gracilibacteria, Bacteria

Not on your lists

155511..155588
DNA (78bp) protein (26aa)
155511..155588 + (rbs_motif=TAA rbs_spacer=6bp)
Displaying items 121-148 of 148 in total

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