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scnpilot_solids1_trim150_scaffold_11

Search features with annotation key words

Displaying items 241-270 of 276 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_11_238
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(248199..248627)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000312109A
Histidine kinase {ECO:0000313|EMBL:KDA06652.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_11_239
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

248843..249091
DNA (249bp) protein (83aa)
transcription factor WhiB n=1 Tax=Microbacterium yannicii RepID=UPI0002DC4CB7
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
regulatory protein
scnpilot_solids1_trim150_scaffold_11_240
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(249181..250266)
DNA (1086bp) protein (362aa)
TOBE domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WTI5_PROPF rbh
TOBE domain-containing protein rbh
TOBE domain protein {ECO:0000313|EMBL:AFN46501.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
scnpilot_solids1_trim150_scaffold_11_241
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250269..251162)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y0M4_PROPF rbh
ABC transporter permease rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AFN47127.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
scnpilot_solids1_trim150_scaffold_11_242
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(251155..252078)
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y6F0_PROPF rbh
ABC transporter permease rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AFN47745.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
scnpilot_solids1_trim150_scaffold_11_243
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(252091..253413)
DNA (1323bp) protein (441aa)
ABC transporter, solute-binding protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XLL8_PROPF rbh
ABC transporter substrate-binding protein rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AFN44948.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
scnpilot_solids1_trim150_scaffold_11_244
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(253448..254452)
DNA (1005bp) protein (335aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y1F3_PROPF
oxidoreductase, NAD-binding domain protein
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:AFN47462.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
scnpilot_solids1_trim150_scaffold_11_245
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

254616..255833
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A8D6D rbh
ROK family protein {ECO:0000313|EMBL:EMF57049.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
XylR-type repressor rbh
scnpilot_solids1_trim150_scaffold_11_246
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(255853..257325)
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ATPase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHL3_9MICO rbh
signal transduction histidine kinase rbh
scnpilot_solids1_trim150_scaffold_11_247
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(257376..257768)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036F87F8
Uncharacterized protein {ECO:0000313|EMBL:KJQ55870.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
3-hydroxyacyl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_11_248
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

257878..258531
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIE7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06649.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_249
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(258589..258867)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003458528
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88358.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_250
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

258965..259579
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMK6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ55867.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_251
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

259576..260772
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037C32FF rbh
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:KJQ55866.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_252
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(260720..261943)
DNA (1224bp) protein (408aa)
Glutamate-pyruvate aminotransferase AlaA {ECO:0000313|EMBL:KJQ55865.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KJQ55865.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
class I and II aminotransferase; K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] rbh
aminotransferase AlaT n=1 Tax=Microbacterium barkeri RepID=UPI0002F1FD6E rbh
scnpilot_solids1_trim150_scaffold_11_253
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(261974..262621)
DNA (648bp) protein (216aa)
transcriptional regulator n=1 Tax=Nocardiopsis alba RepID=UPI00034BE7B1
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL27248.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bacterial regulatory s, gntR family protein
scnpilot_solids1_trim150_scaffold_11_254
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(262728..265487)
DNA (2760bp) protein (920aa)
preprotein translocase subunit SecA n=1 Tax=Microbacterium barkeri RepID=UPI000379544C rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA rbh
scnpilot_solids1_trim150_scaffold_11_255
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

265699..266292
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000381F632 rbh
Transcriptional regulator {ECO:0000313|EMBL:KHK98896.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative PadR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_11_256
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

266289..267008
DNA (720bp) protein (240aa)
ABC transporter n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036BBE21 rbh
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK98897.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_11_257
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

267005..269698
DNA (2694bp) protein (898aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003817FB1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98898.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_258
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

269867..271180
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMK1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA06643.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_11_259
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(271383..272039)
DNA (657bp) protein (219aa)
RNA polymerase subunit sigma-54 n=1 Tax=Microbacterium barkeri RepID=UPI0002D4FC3C rbh
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:EYT59672.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ribosome-associated protein Y (PSrp-1)
scnpilot_solids1_trim150_scaffold_11_260
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(272130..272786)
DNA (657bp) protein (219aa)
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KJQ53698.1}; EC=2.4.2.10 {ECO:0000313|EMBL:KJQ53698.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036DDF58
amidophosphoribosyltransferase
scnpilot_solids1_trim150_scaffold_11_261
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(272891..274597)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F34B63 rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88366.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_11_262
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(274594..276279)
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
signal transduction histidine kinase; K07654 two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FF520B rbh
scnpilot_solids1_trim150_scaffold_11_263
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(276289..276969)
DNA (681bp) protein (227aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346EB44 rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:EQM77012.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA rbh
scnpilot_solids1_trim150_scaffold_11_264
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

277138..278583
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHK1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL24073.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_265
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

278580..279251
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034750D7
Uncharacterized protein {ECO:0000313|EMBL:KJQ53693.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_266
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

279248..280456
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A14F1 rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88596.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_11_267
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

280453..281469
DNA (1017bp) protein (339aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKK1_9MICO rbh
ATPase AAA {ECO:0000313|EMBL:KDA06634.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Displaying items 241-270 of 276 in total

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